Varroa jacobsoni: 111268589
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Entry
111268589 CDS
T07417
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
vja
Varroa jacobsoni
Pathway
vja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111268589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111268589
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111268589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
Yos9_DD
Motif
Other DBs
NCBI-GeneID:
111268589
NCBI-ProteinID:
XP_022703395
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MNALQSQTQVIMGGPGGPQGGGGGAPTMSPMEREKVFQWIAELVNPETRENSLLELSKKR
EVVPDLAPMLWNSFGTIAALVQEIIHIYPAINPPSLTAHQSNRVCNALALLQCVASHPET
RSFFLQANIPLYLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPL
CLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVISLAKEQSS
RLLKHVVRCYLRLSDNARAKEALRQCLPDQLRDNTFSNCLKEDRSTQHWLRSLHKNLAED
PQEGILFSPQQAGQVPASS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgctacaatcgcagacgcaggtaattatgggcggaccaggtggtcctcaagga
gggggcggaggtgctccaacgatgtcaccaatggaacgcgaaaaggttttccagtggata
gctgaacttgtaaatccggaaacccgtgagaactcccttcttgaactcagtaaaaagcga
gaagttgttcccgatctggcgcctatgttatggaactcgtttggcacaattgccgctcta
gtccaggaaatcattcacatctatccggcaatcaacccaccatcgttgacagcccatcaa
tctaatcgtgtctgcaatgccttggcgctgctgcagtgcgtcgctagccatcccgagacg
cggtcgtttttcctgcaagccaacattcctctttatctgtacccgtttttgcataccgtg
tcgaagacgcgcccgttcgaatacctgcgcctgacgtctctgggtgttattggtgcgctg
gtaaagactgatgaacaagaggtcataaatttcttgctcaccacggaaataattccactc
tgtctgcgaattatggaaagcggcagcgaactctccaagacagtggcgacatttattctg
cagaagatccttttggacgacactgggttagcctacatctgtcagacctatgagaggttt
tcacacgtggcgatgattttgggtaaaatggtgatctcattagccaaggagcagagttcg
cgacttctcaaacatgtggtgcgatgttacctgcggcttagtgataacgctcgggcaaag
gaagccttgcgtcagtgtctacctgatcagctcagagataacaccttttccaattgcctt
aaagaagacaggtcgacccagcactggcttcgttcgcttcacaagaatcttgctgaggat
cctcaggagggaatattgttctcacctcagcaggccggacaggtgccggcatcaagttaa
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