Varroa jacobsoni: 111268632
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Entry
111268632 CDS
T07417
Name
(RefSeq) AT-rich interactive domain-containing protein 2-like isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
vja
Varroa jacobsoni
Pathway
vja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111268632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vja03000
]
111268632
03021 Transcription machinery [BR:
vja03021
]
111268632
03036 Chromosome and associated proteins [BR:
vja03036
]
111268632
Transcription factors [BR:
vja03000
]
Eukaryotic type
Helix-turn-helix
ARID
111268632
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111268632
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
111268632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
111268632
NCBI-ProteinID:
XP_022703471
LinkDB
All DBs
Position
Unknown
AA seq
1436 aa
AA seq
DB search
MDKLHPEATEASQFVQTLHDFHRGRGTDFKFAPKICGQEIDLHQLYKTVTAAGGSGKLNE
RPERWYEITNALRFPDKCPNSTLVLRQIYQRYLGTYEKVTFLGEDPDLEVEDSGEVTSSS
FRGGRNSSRGGGVSANAFVIQVPMSYNRQQHEVTDGQRANYGLSTQLAPPVSPFERLCFS
LQSGLPNEETFALNVCTLLANGGRHAMQLNKAPPRLVDLLVSQAGLTADDGTLRDTLDES
WRACEARRMTRFWQEHVDPAVGLCLGLPPLDRFAEAAEKIVEERDCVELIAEGGFMATRE
ALEDEDDFFNLDNEVSPRDAEAQRVLRIALILHNLSFEEANAQILAQNQAFLRMMMLAAV
SRWASLRQVGLDCLSNVAPHLQLNVHDDIVCRSLLRLTIDGILKSEDRGLVTRCLDIITH
LAQCESNQQTLVAELDSSLLERLLELLTVHDVLLIIHSLETLYALTELGDGVCERLVAVR
HAIAMLVSMLSLDPIAYGPGAQRGMKIVEHFDPLLPPATAPLIPSTLSSHHGHTQLMPAV
VQTTHMAPPAAPVQPLMGRPMGQPNGGIASGAQPPIGATPPVHTVAPSMPGGAPDTGSVG
ETEALATAWIRAHIELTPGSSVGRQELYADYVNFCSKAGRRSVLSGHHFSTCIRTIFPQS
ALKVTQVTGPNQQLSQVFQYENLRRRAVPLTVTVTQTGVGSAQAGASTAVVNQVSRNLQK
AALDSARAALPEGAQAPPTVAVQRPPSTKTALTPGEVASITTAPVLTAAVKPEDGAGSVA
GVGPHVNGVAEKDSAATTGEPLASRGVGPASEATSVTTRPTVGVMVTAPATPKANGNHET
AISNTTSNAKVYKSSPLLNGLLDRGTSLQQSPLQRCTTSTAVNGNGAVDVVMTGTNSNSN
NGTSVPLVDSRLSLPNGEMPLAMGTTTSNTMEVRKRRLTFVSEDSNSQDATQERQQSSLS
TNANSALSKLLQNGTIEDSNSGNPNSTTTSTAMEVTTASTGGSILNNNNNAKRMKLMQDD
EKQPFQPPVKHTNGDVKARETGVVALGGNPIDSSSTPVASAVTVATSNPSVVGSVLVAPK
DTIPFSSHLEVSSPHQGHQQQASQQEVIEGAKQPHENINKQPQQQQQQALPTCIVDPAQQ
AQVQPPQSAQPLLPQAQSTIQQPKEVQRSVPPSHGAGSAVVVTAPALSASVPVPAAPAIE
KRVLRYYCEWKGCDQSFGSARHVLLHAIYAHVGLRGGSNPVQPPPNMDPARDSLFCQWGV
GGDKESCDGMARRRLSLCTHVQERHCSEAHLHVQAIRRQQISQFGAASLPAPVQPPPHPG
YAADAAAHAIRRHAASFHAYRDAADEREHPVTRSVRLTAALILRNLARHVPSCRSRLAQY
ESRLSQVAMSALESSRTVAQCLADLHMQQDSAAKTTLSMEHSQLFQEGTRPRYSTD
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctccatccagaggccacggaggcctcgcagttcgtccagacgttacacgat
ttccaccgtggacgcggaaccgactttaaattcgcgcccaagatttgcggccaggagatt
gatttgcaccaactctacaagacagtgaccgctgctggaggatctggaaagcttaacgag
cgtccggaacgatggtatgagattacaaacgcattgcggtttccggacaaatgtccaaat
agtacgctggtacttcggcagatttatcagcgctatttgggaacctacgaaaaagtaacc
ttcctcggtgaagaccccgacctcgaggtggaagattcaggcgaagtaacctcatcatca
tttcgtggcgggcgaaattcgtcacggggaggtggggtcagcgcaaatgccttcgtaatt
caggtgcccatgtcatacaatcggcaacagcatgaagtcaccgatggccaacgagcaaat
tacggcttatcgacgcaactcgccccgccagtatcaccgttcgaaaggctgtgtttttca
cttcagagtggcttaccgaatgaggagacgttcgcgttaaatgtgtgcacgcttttagca
aatggcggtcgacatgccatgcaactaaataaggcaccgccgcgcttagttgatctcctt
gtgtcacaggctgggttaacagccgacgatggtacgttgcgggataccctcgacgaatcg
tggcgggcatgcgaggcacggcggatgacgagattttggcaggagcacgtcgaccccgcc
gtcggattgtgtctaggactacccccgctagatcgttttgctgaagcggccgaaaaaatt
gtcgaggaacgagactgcgtagagctaatagccgaaggtggatttatggctacgagagag
gctctcgaagatgaggatgatttcttcaaccttgataatgaggttagtccgagagacgcc
gaagcgcagagggtgttgcgcatagcgctgatcctacataacctcagctttgaggaagcg
aatgcccaaatactagcgcagaaccaagcgtttcttcgaatgatgatgctggcagcggtt
agtcggtgggccagtttgcgacaggtggggctcgactgtctatcaaatgttgcaccccat
ctacagctcaacgtacatgacgatatcgtctgccgaagtttgctacggctcacgatcgat
ggcatcttgaaatctgaggatcggggtttggtcactcgctgcctcgacatcattacccat
ttagcccaatgtgaaagcaatcaacagacgctcgtcgccgaactggacagctcgctgctt
gagcgcctactcgaacttttaaccgttcacgatgttctattgataattcacagccttgaa
acgctgtatgcgttgaccgagctaggcgatggcgtctgcgaacgtctggtcgctgtccgt
catgcgatcgctatgctggtatcgatgttatcgttggaccctatcgcgtacggccctgga
gctcaacgcggaatgaagattgtggagcactttgatcctctgttgccgccagcaacggcg
ccactcattccctcaacattatcgtcgcatcatggccatacgcagctaatgccggcagtc
gtacagacgacgcatatggcaccaccagcagcgcccgtgcaaccactcatgggtcggcct
atgggacagccaaatggagggattgcgtctggagcgcaaccgcccattggagcgaccccg
cctgttcatactgtcgctccgtctatgccaggaggcgccccggacaccggttctgtgggt
gagacggaagcgctggctacagcatggatacgcgcgcatatcgagctgacgccgggatcg
tccgtaggccgtcaggagctttacgctgattacgtgaatttctgctcgaaggctggccgt
cgcagcgttcttagtggacaccacttttcaacatgcattcgaacgatctttccacaatca
gctctcaaggtgactcaggtgacaggccctaaccaacaattgagccaggtattccaatat
gaaaatttgcggcgtcgggctgtgcctctcacagtaactgtgacccagaccggagtaggc
agtgcacaagcgggggcgtccacagccgttgtaaaccaggtctcgcggaatctccagaag
gcagcgctggatagtgctagggcggctttgcctgaaggcgcccaagctccaccgacagtg
gctgtacaaagacctccgtcgacaaaaaccgcgttgacaccgggagaggtagcatctatt
acaacagctccggtacttacagccgcggtcaagcccgaagatggcgcaggatctgtcgcc
ggcgtaggacctcatgtgaacggtgtcgctgagaaagattctgcagccacgacgggtgag
ccgcttgcctctaggggagtcggtcccgcatcagaggccacaagcgtcacgacgagacca
actgtaggagtgatggttacagcgcctgcgacgccaaaggcgaatggaaaccacgaaacg
gctatctcgaatactacctccaacgccaaggtctataagtcatccccgctgctcaacggt
ctcctcgacaggggaacctcactccagcagtcgccgcttcagcggtgtaccacctcaaca
gcggtgaatgggaacggagccgtagacgttgtaatgaccggaacgaatagtaacagcaac
aacggaaccagcgtgcctttggttgatagccgactatctctacccaacggagagatgccg
ctggccatgggcacgaccacctcaaatacgatggaggtccgcaagcgacgacttaccttc
gtgtctgaggactcgaacagccaggacgctacgcaggaaaggcagcaaagcagcttatcg
accaatgccaattcggcgctatcgaagctgcttcaaaacggaactattgaggattcgaac
agtggcaatccgaactctacaacaacttccacagcaatggaagttacaactgcaagtact
ggcggcagtatcttaaataacaacaataatgctaaaaggatgaaactgatgcaagatgac
gagaagcagccgtttcagccgcctgtcaagcatacgaatggagacgtgaaagccagggag
accggtgtagttgcactgggcggtaaccccatcgactcaagctcaacgcccgttgcctcg
gctgtcacggttgctacaagcaatccatctgttgttggcagcgtgctcgttgcgccgaaa
gacacaatccctttttcaagccaccttgaagtatcatcacctcatcaaggccaccaacaa
caggctagtcaacaagaggtaatcgaaggcgcgaagcagcctcatgaaaacattaacaag
cagcctcaacaacaacagcagcaggctctgccgacctgtatcgtcgatccagcacagcaa
gcccaggtacagccgccacaatcagcgcagcctttgctgccgcaggctcagtcaacaata
caacagcccaaggaggttcaacgatccgtgcccccttctcatggtgctggctccgcggtt
gtcgtcacagcacctgcactatctgcttctgtcccagttccagcggcacccgcaatcgaa
aaacgggtacttcgctattattgcgaatggaaaggctgcgatcagtcgtttggctccgct
cgccacgtgctcctgcacgcaatctatgcccatgtaggtttgcgtggagggtctaaccca
gtacaaccaccacccaatatggatccagctcgtgatagtctattctgccagtggggcgtt
ggtggcgataaagaatcgtgtgacggcatggcccgtcgacgtctctctctctgtacgcac
gtacaagaacgccactgttctgaggcgcatctccacgtacaggctattcgacgccagcag
atcagccagttcggagcagccagtttaccggctcctgttcagccccctccacatccggga
tacgcagccgacgccgctgcccacgctattcggcggcatgctgcgtcgttccacgcctac
cgggacgctgccgacgaacgggaacacccggtcactcggagtgtgcgtctgacagccgcg
ttaattctgcgtaatctggcgcgacatgtgccgtcatgccggtcacgtcttgcgcagtac
gaatccagactttcacaggtggccatgtcggctttagagagttcacgtacagtggcgcaa
tgtctcgccgatttgcatatgcaacaggactcggctgctaagacaacgttatcaatggag
catagccagctgtttcaggaggggacgcgaccccgttattctacggactaa
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