Varroa jacobsoni: 111268753
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Entry
111268753 CDS
T07417
Name
(RefSeq) DNA topoisomerase 1-like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vja03032
]
111268753
Enzymes [BR:
vja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
111268753
DNA replication proteins [BR:
vja03032
]
Eukaryotic type
DNA Topoisomerases
111268753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
N4_RNAP_helical
Motif
Other DBs
NCBI-GeneID:
111268753
NCBI-ProteinID:
XP_022703641
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MTSADVDVGQTVGEASTEAVTDKKENGHINGSIENGDAHKNDEKRHSSSGHRDSSAKDKD
HQRSKDKHSSSSKDKDKHRSSSSHHSSSKDKDRHRSDKDKDRHRLDKEKDRHRSDRDKER
ADKDKDRHRDKHRSSDKDKHRSDKDKDRDKDKHRSSDKDKEKDKHRSSDGKDKDKERKSH
SSSSKDKDRDREKDKDRHSTSSKSKDKDRHSSSSSHHKDKHSSSHHRSEKDREKDRHHSS
SHRDREKDQERRERKGREKREKEEADRMKNGGPPPNNNNGSGSDARFDDEYSMELGSTLA
NGLEPDMAVKTEPDSPMRCEQPMPRMTMTLVSETVKEEDKDESMEQQDEDDDDDADEADS
GADEGKLTLKEEEGSEPEDAEKDAQEDDSDNEPLAAKLARVRQTKIEASQESADESDDEP
LSKKLSRVKKAQAAKSRTGKKRKHSHGTDDSDSDHGDDDDDDDCKMDVDGNDTSDDDDDD
DGGGDDDDAEAGVNVGNEHNGGGDRMKGAKSSRLAFKVEPIENSATTGSSSDNNEDSQSE
DSDEEPLAKTLERARKRARLEDQSISQETGYGSTSDSDEPLSKKLERYKAKSKMKAHKNK
FKTASDDDDWGAGGDSDDSGAMKKRKKTAKTKASTRTPVKKGARPSTDAEAVSPKKRKAD
EEEEDVWKWWEEDKKPEGVKWNTLEHKGPVFAPDYEPLPDNVPFFYNGKRIKLSLEAEEI
ATFYARMLDHDYTQKEAFNKNFFHDWRKFMTAQEKETISDLKKCDFSKMASYFKELSELR
KNRTKDEKLEEKKKNEAQIKEYGFCIIDGHKQKIGNFKIEPPGLFRGRGEHPKMGKLKTR
TQPEDVIINIGKDAPIPPPPKGHRWKEVRHDNTVTWLCCWTENIAGSNKYIMLNPSSKLK
GEKDFQKYETARRLKSCVKSIRDNYQADWKSKEMRIRQRAVALYFIDKLALRAGNEKDSD
EQADTVGCCSLRVEHIRLHDELDGKENVVEFDFLGKDSIRYQNAVPVEKRVYKNVKLFCE
GKKPGDDLFDRLNTTILNKHLNELMEGLTAKVFRTYNASKTLQEQLEQLTDPDMSIAEKM
LAYNRANRAVAVLCNHQRAVPKTFEKSMENLQKKIDEKEDQIIEAKREYREAKKHADKAT
AEKKHKRLLTLEDQLKKLQVQATDREENKQIALGTSKLNYLDPRISVAWCKKWGVPIEKV
YNKTQRDKFRWAIEMVEGDYKF
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggcggacgtggacgtcggtcagaccgttggtgaggcttcaaccgaggctgtc
accgataaaaaagagaacggccacattaacggtagtatcgaaaatggggacgcccataaa
aatgacgagaagaggcactcgtcatcgggacatcgggactcatctgcaaaagacaaagat
catcaacgaagcaaagacaaacactcatcatcgtcaaaagataaggataagcaccgatca
tcttcgtcgcatcactcctcttcaaaagacaaagatcgccatcgatcagataaggacaag
gatcgacatcgcttagataaagagaaagaccggcaccgatctgatagggacaaggaacgg
gcggacaaggataaagaccgacatcgggataaacatcgatcgtcggataaagataagcac
cgatcagacaaggacaaagatcgggataaggacaaacatcggtcgtcggacaaagacaaa
gaaaaagacaagcatcggtcttccgatggcaaggacaaggataaggaacggaagtcacac
tcatcttcatctaaggacaaggatagggatagagaaaaagacaaagaccggcactcaacc
tcgtcgaaaagcaaggacaaagatcgacattcttcgtcgtcgtcgcaccataaggacaaa
cactcgtccagtcaccataggtctgagaaagacagagaaaaggatcgccatcactcgtca
tcgcacagagaccgggagaaggaccaggagcggcgagaacgaaaaggacgagagaagcgc
gaaaaagaggaggctgatcgaatgaagaacggcggtccacctccaaacaataataatggt
tctggtagcgatgctcgattcgacgatgagtacagtatggaactcggttcaacgctcgct
aacggactcgagcctgatatggccgttaagactgagcccgactcacctatgaggtgcgaa
caacctatgcctcgtatgacaatgacgctcgtctccgaaactgtcaaggaggaggataag
gacgaatcgatggaacagcaggacgaggacgatgatgatgatgccgacgaggcagatagt
ggcgccgatgaaggcaagctaactctcaaggaggaggagggcagtgaaccggaagatgcc
gaaaaggacgcgcaagaggatgattcagataatgagccgttggccgcaaaactagcgcgt
gtccggcagaccaaaatcgaagcttcacaagaaagcgctgacgaatcggatgatgagcca
ctctcgaagaagctcagcagagtgaaaaaagcacaagcggccaaaagcagaaccggtaaa
aaacgcaagcattctcacggcacagatgatagcgattccgatcatggtgatgatgatgat
gatgatgactgcaagatggatgtggatggtaatgatacgagtgatgatgatgatgatgat
gatggtggtggtgatgatgatgatgccgaagctggtgttaatgtgggcaacgagcataat
gggggtggtgatcgaatgaaaggggcgaagtcaagccgactagcgttcaaagtggagcct
atcgaaaacagtgccactacagggagcagttcggataacaatgaagacagtcaatcagag
gacagcgacgaagagccactagccaagacgttggaacgcgcgcggaagcgggcaagactc
gaagaccaaagtataagtcaggaaactggctatgggtcaaccagtgattcagacgagcca
ttgagcaaaaaattggaaaggtacaaggccaagagcaagatgaaggcacacaagaataag
tttaagactgcttctgatgacgacgattggggagctggtggtgacagcgacgattcggga
gccatgaagaaacgaaagaagacggcaaaaacgaaagcttcaacgagaacgccggttaaa
aagggtgccagaccatcgacggacgctgaagcagtttcaccgaagaaaagaaaggctgat
gaagaagaggaagacgtctggaagtggtgggaagaagacaaaaagccggagggcgtcaag
tggaatactctggaacataagggacctgtattcgccccagattacgaacctctcccagac
aatgtgcctttcttctacaacggaaagaggataaaacttagccttgaggctgaggagatc
gccacgttttatgcacgcatgttagaccacgactatacacagaaggaggcatttaataaa
aattttttccacgattggcggaaattcatgacagcacaggaaaaagaaacaataagtgac
ctaaaaaagtgcgacttcagcaagatggctagctactttaaagaacttagtgagctgcgc
aagaaccgcactaaagacgaaaaattagaggagaagaaaaagaatgaggcacagataaag
gagtatggcttctgtatcattgatgggcacaagcaaaaaattggtaatttcaagattgag
ccgcccggcctgttccgagggcgtggtgagcaccccaaaatgggcaaactcaaaactcgc
acgcaacctgaggatgtgatcatcaacatcggcaaagatgctcctatacccccgccacca
aaaggccatagatggaaagaggttcggcatgacaataccgtaacatggctgtgctgctgg
acagagaatatcgctggtagcaacaaatatattatgctcaacccctcgtcgaagctcaaa
ggtgagaaggatttccaaaagtatgagacggcgcgccgtcttaaaagctgtgtaaaaagt
attcgcgataactatcaggccgattggaaatcaaaggagatgcgcattcgacaaagagcc
gtcgcactttattttatcgacaagctggctcttcgagcgggtaatgagaaggactctgat
gagcaggccgataccgtaggttgctgctcgctgcgagttgaacacatccgactgcatgat
gagttggatggcaaggaaaatgtcgtggagtttgactttctcggaaaggattccatccga
tatcagaacgccgttccagtcgaaaagcgggtttataaaaatgttaagctattctgtgaa
ggcaagaaacctggcgatgacctttttgaccgactaaacacgacgatcttaaacaaacat
ctcaacgagctcatggaaggattgacggccaaggtgttccgtacctataatgcctcaaag
acccttcaggagcagcttgaacagctgaccgatcctgacatgtcgatagccgagaagatg
ctagcatacaatagggcgaatcgggccgttgccgtactttgtaaccatcaacgggcggtg
cctaagacatttgaaaagagcatggaaaatcttcagaagaagattgatgaaaaagaggat
caaatcatcgaggcgaagcgtgagtatcgggaagcaaagaagcacgctgacaaagcgacc
gccgagaagaagcataaacgtctactgacacttgaagatcaactaaaaaaacttcaggtg
caagctactgaccgtgaagaaaataagcagatcgcgctcggcacctctaagctcaactat
ctcgatccccgcatatctgtagcctggtgcaaaaagtggggcgtacccattgagaaggtt
tacaacaagacccaacgagacaagttccgatgggccattgagatggtggagggtgactac
aagttctag
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