Varroa jacobsoni: 111268899
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Entry
111268899 CDS
T07417
Name
(RefSeq) syndetin-like isoform X1
KO
K23288
syndetin
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vja04131
]
111268899
Membrane trafficking [BR:
vja04131
]
Protein recycling
Others
EARP complex
111268899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
111268899
NCBI-ProteinID:
XP_022703849
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MDLSRRLKDAVKPLQKSAFVQDLQEKVQQLRSPNSETKNHLESGTFLEDTIVPQRVPIQH
ALKVDPAVEEALLDSIDPRYYDEKFDSSLFELEKLADGVPPELVNINRQVLEKQLAVVTN
KVYQLIVGKQSEYSAEIVHVVALQSRLTDCLAQCVEARRALRRTQTDFTDENLRVLQCAR
RRNLLMDTLSKLSVIKTLHQTDIRLYELLEMREYPTAIQLLLECRQALQDYQQFDCMKQL
SLKFDRTLEKTEQQLDVALSKLCLDYNEEAYAKLTSALTLLGRGPNILDQLLMHFTLTIH
NLSLVTVAKHGQHGEPGKKQYADLCQAVNEDRYPECLRELAQAFFRLMVSYRQVLEWHER
GVKDEEDDSDSAHSHRSEPEAANGGDASDVPVSSSEHHPPVGTLKSQPAEPNNMLGSPAS
STHSSPSKEKVGEKCLARQKLRNGLHRLWSDMQQKFKLLLSSFSWHATTEFDKFIAVINT
TKVMVEVGELFCEQSGCSSDLETSAEEQCLRYLHSYHGQSLATLKTYLEHESWELMPVRD
GFSLDNLHEFCFLHAAQEAARSEKMLPSSSSPLKTLSENEISFTPDAPDPFAVEVAVQSS
DLDNSIFEDEGGDDEDDDEKKSLQHRFPKHAITNTSLTIFRLLGRYLNMMAALGGGQKVT
ALGLSSVVQLFEYYLHTVSAYFASESAENFPWSVSPSCRRVLQRIKESLSSCSEELRVQL
PDLTPLQDGAMDTFSLRKRVAACESLTFLSVQLQLLLPQVEGRERRENGDICGSQHVSGN
SREKLDQFTVDADCARELYHSVYLAVPAKFINLPQILDLMSSVNWDLRDIQTQHSPYVDL
LLQQLTNLEQTLWDSNLPKEVLKHFWIVTLRLCSQAFIEGFASAKKCSNAGRALMQLDWQ
QFLSKVERMRVKLKPVPDQTQVEALVRAYYLIDRPLEEWLVTNGPFYSKKQLLGLVNSMS
HVNRRARQSLVQMIEEQR
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggaccttagccgcagactgaaggatgccgtaaaaccgctacagaaatctgctttcgtt
caagatcttcaggaaaaggttcaacaactgagaagtccaaattcggaaacaaagaatcat
ttagagagcggaacctttcttgaggacactatcgtgccccagcgagtgccgatccagcat
gcgcttaaggtagaccctgccgtagaggaagctctcttagactcaatcgatcctcgatac
tatgatgagaagtttgactcatcgctgtttgaactggagaagttagccgatggtgtacct
cctgagttagtcaacattaatcggcaagtactggagaagcagctcgctgtcgttaccaac
aaggtgtatcaactgatagtcggaaagcagtcggagtactctgcagagatcgtccatgtt
gtggcattacagtctcgactaacagactgcctagcccagtgcgtggaagcgcgcagagca
ctcaggcgcactcagacagattttactgatgaaaacctcagagttcttcaatgtgccaga
cgaagaaacctcttaatggatacactgtcaaagctgtcagtgatcaagactttgcatcaa
acagatatccgtctctatgagctccttgaaatgcgcgaatatcccaccgctatacagctt
ttgctggagtgtcgtcaagcattgcaggactaccagcagttcgattgtatgaaacaactc
tccctaaaatttgaccgtacccttgaaaagaccgagcagcaactggatgtagctctttca
aagctctgcttggactacaatgaagaggcgtatgcgaagctcacttcggcgttgacgctt
cttggccgcggtcccaacatccttgatcagctccttatgcactttacgttaactatccac
aatctttcactggttaccgtcgcaaagcatgggcaacatggggagcctggcaaaaaacag
tacgctgatctttgccaagcagttaacgaagatagatatccggaatgcttacgagaattg
gcccaagcgttctttaggctaatggtgagctatcgacaagttcttgaatggcacgaacga
ggcgtgaaggatgaagaagatgacagtgatagcgcccatagccacaggagtgagccggaa
gcggctaatggaggtgatgctagcgacgttcctgtaagctcctcggagcatcatccaccc
gtgggtacattgaaatcgcagcccgccgaaccaaacaacatgctgggttctccggcatcc
tctacgcacagtagtccctcaaaggaaaaagtgggcgagaaatgtctggcccgtcagaag
cttcggaatggtttacataggctttggtcggacatgcagcagaaattcaaattgctcctt
agctccttcagttggcatgctacgacagaatttgataaattcatcgctgtgataaatact
acaaaggtaatggtagaagtgggtgagttattttgtgaacagtcaggatgcagtagcgac
ctggagacgagcgctgaggaacagtgtctgcgttatttacactcatatcacggtcaaagt
ctggcaaccttaaaaacttacctggagcacgaatcgtgggagctaatgccagtgcgagat
ggattttccctggataatcttcatgaattttgcttcttgcatgctgctcaagaagccgct
aggagcgaaaaaatgctgccatcttcatcctcgcctttgaagacactctcagaaaacgag
atatcatttacgcccgacgcacccgacccgtttgccgtcgaggtggctgtacaatcaagc
gacttagacaattcgatatttgaagatgaaggaggagacgatgaagacgatgatgagaag
aaatcattgcaacatcgatttccgaagcatgccatcacgaacacgtcgctgactattttt
cgtcttcttggtcgctacctaaatatgatggcggctcttggtggaggtcagaaagtgaca
gcgcttggcctgtcttctgtagttcaactcttcgaatactaccttcacacagtgtcagct
tacttcgcaagcgagagcgctgaaaatttcccatggagtgttagtccttcatgccgacga
gtgcttcaacgaataaaggaatcattaagttcatgctctgaagagcttcgagtacagctg
ccagatttaactccattgcaggacggggccatggacaccttcagtcttcgcaaacgggtg
gcagcttgcgagagcttaacgtttctctccgtacagctgcaactactccttcctcaagtc
gaaggtcgggagagacgagaaaacggtgatatatgtggttctcaacatgtttcaggaaac
agtcgagaaaaactcgaccagtttactgtagatgccgattgcgctcgcgaactctaccac
tctgtttatctagcagtaccagcaaaatttataaatttacctcaaatccttgacctaatg
tccagtgtcaactgggatctaagggacattcaaacccaacacagcccctatgtcgaccta
ctgttacaacaactcacgaacttagagcagactctttgggatagtaacctccctaaagaa
gttctcaagcatttttggattgtcacgctgagactctgttcacaggcgtttatcgaagga
tttgcaagtgcaaaaaaatgttccaacgctggaagggcacttatgcaacttgactggcaa
cagttcttatcgaaggtggaacgtatgcgagtcaagctaaaaccagttcctgaccagacg
caggtagaggctctcgtgagagcgtactacctaattgaccgtcctctagaagaatggctt
gtgacaaacggacccttctactcaaaaaaacagctgcttggcctcgttaactccatgagt
catgttaatcggagggcgcgacaaagcctcgtgcaaatgattgaggaacagcgatag
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