Varroa jacobsoni: 111268921
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Entry
111268921 CDS
T07417
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
vja
Varroa jacobsoni
Pathway
vja03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111268921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111268921
03036 Chromosome and associated proteins [BR:
vja03036
]
111268921
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111268921
Coactivators
SAGA/TFTC/STAGA complex
111268921
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111268921
STAGA complex
111268921
TFTC complex
111268921
SAGA complex
111268921
SLIK complex
111268921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
Bromo_TP
CENP-T_C
CBFD_NFYB_HMF
CNV-Replicase_N
Motif
Other DBs
NCBI-GeneID:
111268921
NCBI-ProteinID:
XP_022703897
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MQPQQFVLLGTTSVERWSEQLDLSLDADALTILTEDLNFRLRQLAHDASQHMRHSGRRRI
TPNDIDRALQWCNFGPSCGLGCRTSTEQTDYVQIDDMSVPIFKSIEVENALDVRLDLDVE
PVLPACLSQWALVDGRAQPGVEIEYPEGQRKLDAFTSVHSEYLEQAVQAIMSDSDEATAL
IMDDLASNPNLAVLLPSLLNSISVGLRQYHHDPPRMFRLLGAFKALVNNDYLLMTSSASL
QACLQILYYCLRESLAMEATETTDELTFRMKAAYVMQFFVEMNSNSTNRLEEEVTARCMN
DCLTGNIDAMYGALFTLRLLGKGRLVLKELPALIAVIEPLEQLPAASAKACLARGFLHEF
ARQEIVQAQTAILHNERYEVDYSAIEQYLGPSIAAMLHPLSIGEFLFRPARSSPLAENDN
SSDQLLGSFYEDSTQTVHSGSPKKQPRLKPSSSILRSQLIKRSPNAPCSSIYEAFEMSRL
CGQRIRFNYGQPVVTMERPKPVTLHEVHAKTRAKFAAIVAKQHGLTPNKRLMMNRERRSW
SAIMRSACVALVL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctcaacagttcgtccttctgggcaccacctcggtggaacgctggagcgaacaa
ctcgatctttcgttagacgcagatgctcttacaattcttaccgaagacttgaacttccga
cttcggcagcttgcccacgacgcctcacaacacatgcgtcattctggtcgtcggcgaatt
acgccaaacgacatcgatcgagcactacagtggtgcaatttcggaccatcgtgtggccta
ggatgtcgaactagtactgagcagactgattacgttcagatagacgacatgtcggtgcca
atttttaaaagtattgaagtcgaaaacgcattggacgtccggttagatctcgatgttgaa
cctgtattgccagcctgtctcagccaatgggcacttgtcgatggccgggcacaaccgggt
gtcgaaatcgaatatcctgaaggacagcggaaattggacgccttcacctcagtacactcg
gagtatcttgagcaggctgtgcaggcgatcatgtcggatagcgatgaagcgacagcgcta
atcatggacgaccttgcctcaaacccgaatctagccgttctgctaccctcgttattgaac
tcgatcagcgtcggacttcggcaatatcatcacgacccgccaaggatgttcaggctgctt
ggagcgtttaaggctctcgtcaataatgactatttgttgatgaccagcagcgcttcactg
caggcgtgtctccaaatcttgtactactgtctacgtgagtcactagcaatggaagcgacg
gaaacgacagacgagctcacttttcgaatgaaggcggcgtacgtgatgcagttctttgtc
gagatgaactcgaattcgacaaatcgtctcgaggaggaggtcaccgctagatgcatgaac
gactgtttgacaggcaatatcgacgcaatgtatggggccctattcactcttcgccttctt
ggaaaaggacggctggtcttaaaagagctacctgcactaatagctgttatcgaaccgctt
gagcagttgcctgctgcatctgctaaagcatgccttgctcgtggctttcttcatgaattc
gctcggcaggaaattgtgcaggcgcagacagccattctacacaacgaacgctacgaagtc
gactactcagccattgaacaataccttggaccgagtatcgcggcaatgctgcatccttta
agtataggtgaattcttgttcagaccggccagaagttcgccgttagccgaaaacgacaac
tcttccgaccaattgctcgggtcattctacgaagattccacccagactgttcacagtggc
tcaccaaagaagcaaccacgtctcaaaccatcgagtagcatactgagatcacagctgata
aaacgatcgccaaacgctccatgttcgagtatttacgaagcgtttgagatgagccgtctg
tgtggacaacgcatccgatttaactacggccagccagttgtcacgatggaaaggccgaaa
ccggtgactcttcacgaggtgcacgccaagacgcgagcgaagtttgccgccattgttgcc
aagcaacatggactaacgccgaataagaggcttatgatgaaccgagaaagaagatcgtgg
tcggcgattatgcgatctgcctgtgttgcactcgttctctag
DBGET
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