Varroa jacobsoni: 111269169
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Entry
111269169 CDS
T07417
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
vja
Varroa jacobsoni
Pathway
vja04150
mTOR signaling pathway
vja04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111269169
04150 mTOR signaling pathway
111269169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vja04131
]
111269169
Membrane trafficking [BR:
vja04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
111269169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
Vgb_lyase
SGL
DUF5050
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
111269169
NCBI-ProteinID:
XP_022704312
LinkDB
All DBs
Position
Unknown
AA seq
1711 aa
AA seq
DB search
MWIRRVETGGACHGPFVCMSLLAVLALSLWIILVEAVGAGGSSVSTGNNGNFNNEVRLML
IANRKDIRALEVERNISKVVVDKTNEAVALSFVYSAGTLFWTDVEHHRIMRAPMPAAISS
SSVLGAFTPTQPNAHQVVINNFGQVDGLACDWVTLKIYWTDSKLRRIEVAELDGKHRKVL
YWTDIELPRSIAVVPSHGFVFWTDWGEKAKIERASMDGYSSDRKIIVRTNDLGWPNGITV
DLEESRVFYSDAKVSQVYSMNFDGGDRRVVQKYDGHPYAIVVMGPNVYWTDWQNNSIYTT
LKTGQSKIRKAWPDLHLSVLDIKFYASSQQPINGTSPCRENNGGCSHLCLLTSRSSTKRT
CACPTGVRLRNDKRNCENGAGNMLFIARKVEIQGISLDTSDHTRVSLPLRGVKHAVSVEF
DRKEGFLYWADDITKSINRAKLDGTQQQSIINKDLFVPDGIALDSVARNIYFVDSEARRI
QVALLNGKYRRTIISEGLIKPRAIAVDSGGGKIYWTDWGIGRVERSYVDGNQRETLIDTE
VAWPNGLTLDCVHEKMYWGDAKYHRVEEANMNGSARRILQKDVPHMFGLTLHQGSLYWSE
WQLGVLERFDIAEGKREVVLSNIQDMMMLWAGGIRSEVDEKNAEADDSEGNPCHGGGGCS
HLCLNTPAGKVCACPDNMTSTEDGKSCVVDRPILLVASRDGRLTQAQLMSNSSLRTATSD
TISQVQAVGPIDYYWAEGSVFFVDSIEQSICRTYLERPSRVEAVVKNGLENVVGLAVDWL
TGNLYWTDNDSNRLEMSRLNGAYRKVLLWKDMKPAALVVDPLGKQLYWVDSFGEHPRIDR
CRLDGSKRTKLVDTKSVARSLSLDPVDKKIYWSDGESIESAELSGKSRRAVLWSAKFRAN
RLAVHGGTVLLTDGSTDVVSAPVGRPDLAVKVWSEHEGKTIADLKIMHRPSQLGWNHCAM
SNGNCGSLCLAAPSKDKPYYCSCPTHYFLSDSEPNVGSCVLPQSVLLFAQKNSISRILLD
EDSPDIVLPIEARNVRSLHFDIYSGYIFWLDSRREEIFRSRDDGGNSGSAFKPTNNGSHL
ESFAMDPLTGQLFWVCSYRNTINIARLMPQGNFKQVGVIVALEKPRLPAVHPQKSLLVFV
NQNNNGVSVMSCSFDGTSLKKIFEGDKQMPSDLVVDTIDNLVFWSNPETKTIYSMALDGT
FHNTVVTKVDAYALSIYDTKLIVMSRAGQEISIYDKKSGQKQPDFITRRSHLTDVYTPPL
DLPQSKPHECPCSHVCLAHGESDVKFACTCPTQYAEGSCDVAQCGSHEWTCHSGGKRCIP
LEDRCDIKKDCLDESDELDCCTEVDHFKCSSAADKCIPSKRVCDGHRDCPDGSDEIDCEP
QDCKTDGGGTGQGSLENSGSCCPGGFRCQKATGRHVCIRPDKMCDDIDDCADRTDELSCC
GTRHFQCHSGSQNCIDASKICDGSQDCLDGSDEFSCCNNTCKAGYLLSQPNEILTSTSDP
AGLHWPIIFIGIIAVVVILIVLTLCGKRDTKTPQDMPLHYHVHPPGLSLPSVTGHTIMTG
PSIASSATSSDQKTSMYRYDPPPSPATVQSYESSFYHKATARRSVPSSTCSSSQFGGYVG
SDASFLGGAMPARRGRNRGRSRFATTSSRGQRPNTPCSTDACEDSDAALYQYNNYNVGIG
VEGYVPPPASPEGSLLYSDITSNGHTESRFV
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgtggatacgacgggtcgagaccgggggagcttgtcatggaccatttgtttgcatgtcc
ctgctggcagtgttagctttatccttatggattattttggtggaagcagttggagcaggg
ggtagtagtgtaagcactgggaataatggcaactttaacaatgaagtacgacttatgcta
atagctaaccgaaaggatattcgagctctcgaagtagaacgaaacatttcgaaggtggtt
gtggacaaaaccaacgaagctgtcgccctgtcgtttgtctactcagcaggtacgctgttt
tggacagatgtagagcaccacaggatcatgcgagctccgatgcctgcggcaataagcagt
tcttcggtccttggggcattcacccctactcagccgaatgctcatcaagttgtcatcaac
aatttcggacaggtcgacggattggcttgtgactgggtcacgttaaaaatttactggaca
gactcgaagctgcgccgcatcgaagtggccgaacttgacggaaaacatcgaaaggttctt
tactggacagacatcgagctaccacgttccatcgcggtggtgcctagtcacggttttgtt
ttttggaccgactggggtgaaaaagccaagatcgaacgagcttcaatggatggatattca
agcgacaggaaaataattgtgcgcacaaatgatctcggttggcccaatggaatcaccgtc
gaccttgaagaatctcgcgtgttttatagcgacgcgaaagtgtctcaagtctactccatg
aactttgacggtggtgatcgacgagttgtacaaaaatatgatgggcatccctatgcaatt
gtagtcatgggaccaaacgtttactggacagattggcaaaataactcaatatatactacg
ctcaagacaggtcaaagcaaaatacgaaaagcatggccagatctgcatttgtctgtgctg
gatataaaattttacgcatctagccaacaacctataaacggaacttcgccatgtagagaa
aataacggaggttgttcacatctctgccttttaacatcgcgatcttcaacgaaacgcact
tgtgcatgtcctacgggcgttcgccttcgtaacgataagaggaactgtgagaacggcgcg
ggaaatatgttatttattgcacgtaaggtggaaatccaaggcatttcactcgacacctca
gatcatacccgagtgtcgttaccgcttcgtggagtgaagcatgccgtctcagtagagttc
gatcggaaggaaggtttcttgtattgggccgatgacataacgaaaagtattaaccgtgca
aagcttgacggaactcaacagcagagtattattaataaagacctcttcgtaccggatgga
atcgcattagattccgtagcgaggaatatatacttcgtggattcggaagcacgccgcatt
caagtcgctctactcaatggaaaatatcggaggacaataatctccgaaggactaataaag
cctcgggccattgctgtggattctggtggcggaaaaatttactggaccgattggggtata
ggcagggtcgaacgaagttacgttgacggcaaccaacgtgagactttaatagacactgaa
gttgcatggccgaatgggttaacacttgattgcgtacacgaaaagatgtattggggcgat
gccaaatatcatcgtgtggaagaagctaatatgaacggatctgcgaggaggattctacaa
aaagatgtgccgcacatgtttggactaacgctgcaccaaggcagcctctactggagcgag
tggcagcttggtgtccttgagcggtttgacatcgctgagggcaaacgcgaagtggtattg
tccaatatccaagatatgatgatgctttgggcgggaggaatccgaagtgaagtcgatgag
aagaacgctgaagctgatgattctgagggcaatccttgccacggcggagggggctgttca
catttgtgcttgaacacgcctgcaggtaaggtgtgtgcgtgtccagacaacatgacgtcg
actgaggacggaaaaagctgtgttgtggatcgacccattttgttggtagcatcgcgtgat
ggtagactaactcaagcacagctaatgtccaacagcagtcttcgcacagcgacttcggac
acaattagtcaggttcaagctgtgggaccgatcgactattactgggctgaaggtagcgtg
ttcttcgtagactcaattgagcagagcatttgtcggacatacctcgagcggcccagccga
gttgaagctgtggttaaaaacgggcttgaaaatgtggttggtttggccgttgattggtta
actggaaacctttactggacggacaacgattcgaacagattagaaatgagcagactcaat
ggagcttatcgcaaggtcttgttgtggaaggatatgaagcctgcagcattagttgtagat
ccgttaggtaaacagctgtactgggtagatagttttggagagcaccctcgtattgatcgg
tgtcgtctcgatggttccaaaaggaccaagctggttgatacaaagtcagtggcaagatcg
cttagcctcgaccccgttgataaaaaaatctattggagcgatggcgagagcatcgaaagt
gccgaactcagtggcaaatcgagacgagcggttctctggagcgctaagtttagggctaat
cgtttggccgtacatggtgggactgtcctccttacagatggcagtaccgatgttgtatct
gcacctgttggccgtccagacttggctgtcaaagtatggtcagagcatgaaggcaagacc
atcgccgacctaaagattatgcatcggccgtcgcaactcggttggaatcattgcgcaatg
tcgaacggtaactgtgggtccttgtgcctagctgcaccttcaaaggataaaccatactat
tgttcatgtcccactcattatttcctcagcgactccgaaccaaatgtcggatcatgcgtt
ctcccccaaagtgtcctcctattcgcgcagaaaaactcaattagtcggattttacttgac
gaggatagcccggatatcgtactaccaattgaagcgcgaaatgttcgctctctccatttt
gacatctactcgggctacattttctggcttgacagcaggagagaagagatctttcgttca
agagatgatggcggaaattctggatcggccttcaagccgacaaacaatggttcacattta
gagagctttgcgatggaccccctaactggccaattattttgggtgtgcagttatcggaac
acaattaatatagcaaggctaatgccgcagggaaacttcaagcaagtcggcgtaattgta
gctctcgagaaaccccgactgcctgcagtacacccgcaaaaatcgctgctggttttcgtc
aaccaaaacaacaacggtgtctctgtcatgagctgctcattcgacgggaccagtttgaag
aagatctttgaaggagataaacagatgccatcggatctcgttgtggatacaatcgataac
cttgtattttggtcgaatccggagaccaaaaccatttatagcatggcattggatggcacg
ttccataacactgtggttactaaagtggatgcatacgcgctttctatttacgatactaaa
cttattgtgatgtctcgtgccggtcaagaaatttcgatttatgacaagaagtccggccaa
aagcagcctgatttcataactcgacggtcgcatctgacagatgtctacacaccgccatta
gacctaccgcagtcaaagccgcatgaatgtccttgttcacatgtatgtctagcgcatggc
gaaagcgacgtcaaatttgcctgtacctgcccgacgcagtacgccgaaggttcgtgcgat
gtagctcagtgtggctctcacgaatggacttgtcatagtggtggaaaacggtgcatccca
ttggaggatcgctgcgatatcaagaaggactgcctcgatgaaagcgatgagctagattgc
tgtaccgaagttgatcattttaaatgttcttccgcagctgacaagtgcataccctcaaaa
cgggtctgcgatggacaccgggattgtccggacggttcggatgaaatcgattgcgaaccg
caagattgtaaaactgatggaggtggtacgggtcagggtagtcttgagaattccggatca
tgctgcccgggcggcttccgatgtcagaaggcgaccggtcgtcacgtctgtattcgacca
gataaaatgtgcgatgatattgacgattgcgccgatcggaccgacgagctctcatgctgt
gggacacgacactttcagtgtcatagtggctctcagaactgcatagacgcttcgaagatt
tgcgatggatctcaggactgtttggatggatcggatgaattctcttgctgtaacaatacc
tgtaaagccggctacttgcttagccagcccaatgaaattctaacttctacaagtgatccg
gcagggctccactggccaattattttcataggcataatcgctgtggtggtcattctcatt
gtgttaaccctgtgcggtaagagggacacgaaaaccccacaagatatgccgcttcattat
catgttcacccaccaggtcttagcctgccatcagtaaccggtcacactatcatgaccggg
ccttcaattgcttcgtcagccacttcgtcggaccagaagacgtctatgtaccgttacgac
ccaccaccatctccggctacagtccaatcatacgagtcatcgttctatcacaaagcgaca
gctcggcgctctgtcccatcgtcgacgtgttcgtcaagccagtttgggggttatgttggc
tcagatgcatcgtttcttggcggagcgatgcccgcccggcggggacgcaatcgaggcaga
agtcgctttgcaacaacgtcgtcacgtggtcaaagaccaaacaccccctgctcaacagat
gcatgcgaagattccgacgcagcattgtatcagtataacaactataacgttggaatcggt
gtagaaggctatgtgcctcccccagcaagccctgaaggaagccttctatacagcgacatc
acgtcaaatggccacactgaatcgagattcgtctga
DBGET
integrated database retrieval system
