Varroa jacobsoni: 111269434
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Entry
111269434 CDS
T07417
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like isoform X1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
vja
Varroa jacobsoni
Pathway
vja03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111269434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vja03009
]
111269434
Enzymes [BR:
vja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
111269434
Ribosome biogenesis [BR:
vja03009
]
Eukaryotic type
90S particles
Other 90S particles
111269434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
111269434
NCBI-ProteinID:
XP_022704753
LinkDB
All DBs
Position
Unknown
AA seq
240 aa
AA seq
DB search
MMPEKKRKVEKYEQAEDNEEARKQPKVIPHLKNQEQRLIVVLEGANLEVIKVGERFELLN
CDDHLKQMKKHGKDPAHARPDITHQCLLMLFDSPLNRAGLLQVYVHSSKNALIEINPQTR
IPRTFKRFAGLVVQLLNKMSVRAADSSVKLMKIIKNPVSDHLPIGCKKLTMSFHAEKTVH
PRELVPASGEPVVLVIGAMAHGSVDVDYTEDTFSISDYPLSGALACSKICTAFEEKWGIL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgatgccagagaagaaacgcaaagtcgaaaaatacgaacaggctgaggacaatgaagag
gccagaaaacagcccaaagtaatcccacatttgaaaaatcaggagcaacgactcatcgtt
gttttagagggcgcaaatcttgaggtgattaaagttggtgagcgtttcgagctactaaat
tgtgatgaccacctgaagcagatgaaaaaacatggaaaggatccggcacatgcgcgtccg
gatattacacatcagtgcttactaatgctttttgactcccctctcaatcgggccggatta
ctgcaggtatatgtacattcatcgaaaaacgccctcatagaaataaaccctcaaactcga
attccacgaacatttaagcgtttcgctggactcgtagttcaattattaaataagatgagc
gttcgggcggcggactcttcagtaaagctgatgaagatcattaagaatccagtttctgac
catctgccaattgggtgtaaaaagctcacgatgtcatttcatgctgaaaagactgtacat
ccaagagaattggtacccgcgagcggcgaacccgtcgtgctggtgatcggcgcgatggcc
catggatcagtggatgttgactatacagaagacacattttctatatctgactatccgcta
tcaggagcattggcctgctctaagatttgtacagctttcgaagaaaaatggggcatcctt
tag
DBGET
integrated database retrieval system
