Varroa jacobsoni: 111269438
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Entry
111269438 CDS
T07417
Name
(RefSeq) uncharacterized protein LOC111269438 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
vja
Varroa jacobsoni
Pathway
vja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111269438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111269438
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111269438
mRNA degradation factors
5'-3' decay
Decapping complex
111269438
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
111269438
NCBI-ProteinID:
XP_022704766
LinkDB
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Position
Unknown
AA seq
798 aa
AA seq
DB search
MESTLCVDDELKEDEYDALNDETFGGAEADDAWEENHNVLAAQLEETIKRHHNAQHIEDI
VTTSILQLGLDDEAATNGHGHLPSAGHTTFNSTNSSTNAASILGVGNNSGVISGDYLGGS
SQRSPSGDACPPGFNGFFSRPTALGTGGSVLAGGLIPTGPPHPAPMSGPPVPVGGQLGHS
QPPAGVVVPRPPTAVSPFGSGSPFPSIIGCPAVSAEQLEQQMLQASRAPQSQGRRMKTLG
ELEKEMVQESRRAILARQQQQQQSQQPPQQQQLSQVPPQGQQQELQRPPSVSQYRILRPQ
QQQAPFPTGPLQMIPPPGQSLHAHAPSAAGVTMGHPQRPHHSNQSNQIGDLDYNKKSQSQ
LQAPQLHPLSSAQPQHQQQPASHLEQHRNYRLLLFVFFYRVHDHYGFPDPAVPRPPPWEM
NHNLHHNKWSAQPPIYPPPAHFQRPAFHQPNVPLKFMNFRESYRVSLRRHDDGRLPDWNL
TGGGGGQRRYNTRDVETFGFDAVHEYQQEQDANKATRSTRSDDPYAGLMTEKEKEFVIRV
QMMSLNMQAPHEQDYYYLEYMKRRSQGKAVCRNKLLTQRYERTPDRPHEPQQFENSLGKL
HTVTAHAPKKILDMAGSRKLDDGDGRTVPANTDLLLFRKLLMDTEKSFSLLLKLEDPEVL
TSHEEKLIAAQDLVKRLGPSPDNVLSLRKGRVLVLRSLAALWRLGGYREQCLQMLCSIIE
NLELILLKQKPLGDSVFVDKFDIIEDILRGCVPDEIARLQKCITKHSTAGDEVGEWVLRG
KFGSMLTGKLAEYNVQVA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgaccctatgcgttgacgatgaactcaaggaggacgagtacgacgcgctgaat
gatgagacattcggcggggccgaggctgacgacgcttgggaagagaatcataacgttctc
gccgcccaactcgaggaaacgatcaaacgccatcacaacgcccaacatatcgaggacatc
gttaccacgtcaattctgcagttgggactcgatgacgaggctgctaccaatggtcatggc
cacttaccttcggccggtcacacaacctttaacagtactaatagtagtaccaatgcggcc
agcatcctaggcgttggcaacaacagcggcgtaatcagtggagattatctgggaggaagt
tcgcagcgatctccgagcggtgacgcatgtccacctggattcaatggattcttcagccga
cctacggcactcggtaccggcggctcggtattggccggtggcctcataccaaccggaccg
ccgcatccggcccccatgagcggtcctccagttcctgtcggtggacaattagggcactct
cagccgccggcgggcgtcgtcgtgccgcgacctccaacggcagtatcaccattcggatca
ggatcgccgtttccatcgataattggctgtcccgcagtcagcgccgaacaacttgaacag
caaatgttgcaagcttcgcgagcccctcagagtcagggacggcgaatgaagacgcttggg
gagttagagaaagagatggtacaagaaagtcggagagctattctcgcccggcaacagcag
cagcaacaatcgcagcaaccgccgcaacagcaacaattatcacaagtccccccccaggga
caacaacaagagcttcaacgtcccccgtcggtcagccagtatcgaattttgagaccgcaa
caacaacaggcaccatttcccaccggtcccctacagatgataccgccaccaggtcagtct
cttcatgcccatgctccctcagctgctggcgtcacaatgggtcatcctcaacgtccgcac
cattccaaccaatcgaatcagattggtgacctggattataataagaaatcgcagtcacaa
ctacaagctccgcagctccatccattatcatcggcgcaaccacagcatcagcagcaacca
gcttcccatttggagcaacatcgaaactaccgcttgttactcttcgtcttcttttacaga
gttcacgaccattacggctttcctgatcctgcagttccgcgacccccaccctgggagatg
aatcataatcttcatcataacaaatggtcagcccagccgccaatatacccaccacctgcg
cacttccagaggcccgcattccatcagccaaacgtcccacttaaattcatgaattttagg
gaatcgtatcgagttagcttgcggcgtcatgacgatggtcgattgccagactggaacttg
acaggtggaggcggcggccaacgacgttacaatacgcgagatgtagagacattcggattt
gacgctgttcacgaataccaacaggagcaggatgctaacaaagcgacaagaagtacacgc
agcgatgatccctacgctggtctaatgaccgaaaaggaaaaagaatttgtcattcgcgtt
cagatgatgtctctcaacatgcaagcaccccacgagcaggactattactatctcgagtat
atgaaacggcgcagtcagggtaaagctgtctgccgaaacaagttgctgacccagcgttac
gagcgtacaccggaccgacctcatgagcctcagcagttcgaaaactcgcttggtaaacta
cacacggtaacggcgcacgcgcctaaaaaaatcctcgacatggcagggtcacgcaagctg
gacgatggcgacggccgtacggtgcctgccaacacggatctattgttgttccgcaaattg
cttatggacaccgagaagtcgtttagcctgttgctaaaactcgaagatcctgaggtgcta
acctcgcacgaggagaagctaattgcggcacaagacctcgtcaaacgactcggtccctcg
ccggataatgtcctgtcactgcgcaagggtcgggtgctagtgttacgtagtttagcagcg
ttgtggcgactgggcggctatcgtgagcagtgtcttcagatgctgtgctcgatcattgag
aatctcgagctaattctgttaaagcagaaacccttgggagactcggtgttcgttgacaag
ttcgacatcattgaagacatcttgcgcggatgtgtccccgatgagattgctcgcctacaa
aaatgcataacaaagcatagtacagccggcgatgaagtcggagaatgggtactccgtgga
aagttcggcagcatgttaactggaaagctagccgagtataatgtgcaagtggcttga
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