Varroa jacobsoni: 111269883
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Entry
111269883 CDS
T07417
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
vja
Varroa jacobsoni
Pathway
vja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111269883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vja03041
]
111269883
Spliceosome [BR:
vja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
111269883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
111269883
NCBI-ProteinID:
XP_022705517
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MSKESAKSRSCPYLDTINRSVLDFDFEKLCSVSLSRINVYACLVCGKYFQGRGPSTHAYT
HSVHAGHHVFLQLESLEFFCLPDNYRVVDSALDDILFVLQPRFSHQDIKELDKTEKLSIA
LDGTRYLPGIVGLNNIKANDYCNVILQALSGVAPLRDYMLRDENYRDIKRPPGDNMFLIV
QRFGELLRKLWNPRHFKAHVSPHEMLQAVVLCSKKRFQITNQGDPVDFLSWFLNSLHIAL
NGTNKDSSSVIYKTFRGRMRVYSKKLFPTDPEHQPKVYDPAEYEVKEEKMPFMYLTVDLP
SQPLFRDDQRENIIPQVPLSVIMAKFNGIQEKEYKTYKDNTLKRFEIIKLPKYLILYMKR
FTRNTFFTEKNPTIVNFPIRNVDFGDVLALEARKANPENVYDLVANIVHEGEPNKGTYRC
HVLHRGSGKWYELQDLHVTEILPQMITLSESYVQIWQRTSAPFKDVIKGKTNIKDTTIAP
TAGEDAGEKVQFDEDNNAVPDEKSSSLPKDEVEKSVEMTEDGKEAFEEQVFSVESHEVVA
PASGEGLKGEKGLKRKLEED
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagaatctgcaaaaagtcgaagctgtccctatttggatacaattaacaggagc
gtgcttgattttgacttcgagaagctttgttccgttagtttaagtcgaatcaatgtttat
gcctgtttagtttgtggaaaatatttccagggccgaggaccatcaacacatgcgtatacc
catagtgtccacgcaggtcatcacgtcttcctccagttggagtcactcgagtttttctgt
cttcccgacaattaccgagtcgtcgattctgcgttagatgatatcctgttcgtactacag
ccaagattctctcatcaggacattaaggagctcgataagacggagaagctatcgattgcg
cttgacggaacgaggtatttgcctgggatcgtaggccttaacaacattaaggcgaatgac
tactgcaacgtcatcttgcaagctttgagcggggttgccccattaagagactatatgtta
cgggacgaaaactacagagacatcaagagacctccgggtgacaacatgtttctcattgta
caaagattcggtgagctgcttcgaaagttgtggaacccacgccacttcaaagctcacgtg
tcgccgcatgaaatgttgcaggctgttgttctctgctcaaaaaagagatttcaaatcacg
aatcagggcgatcccgtagacttcttatcttggtttttgaattcgcttcacattgctctt
aacggtaccaacaaagattccagctcagttatctacaaaacttttaggggacgaatgagg
gtatattcaaagaagctgtttccaacagaccctgagcaccaaccaaaagtttacgatccg
gctgaatatgaagtaaaagaagaaaaaatgccattcatgtacctcaccgtggatttaccg
tcgcagcctttgtttcgtgatgaccagcgtgaaaatataattcctcaggtacccttaagt
gtaatcatggccaaattcaacggaatccaggaaaaagagtataagacgtacaaggacaac
acccttaaacgcttcgaaataattaaattgccaaagtatttaatactttatatgaagcgg
tttacgcgaaacacgtttttcacggagaagaatcccacaattgtcaacttccctattcgc
aacgttgatttcggagatgtgctcgcgcttgaggcacgaaaagctaatcccgagaacgtg
tatgatcttgttgctaacattgttcatgaaggagagcctaataaaggaacttaccgttgc
catgtccttcaccgcgggtcgggaaaatggtacgagttgcaagatttacacgtaactgaa
attttgccacaaatgataacgctctctgaaagttatgtccagatatggcagaggacaagc
gcaccattcaaagatgtaattaagggaaaaactaacataaaagacacaaccattgctcct
actgcaggagaagacgccggtgaaaaagttcagtttgacgaggataataatgcagtaccc
gatgagaagtctagctctcttccaaaagatgaggtagagaaaagtgtcgaaatgacagaa
gatggaaaagaagcatttgaagagcaagtttttagtgtcgaatcacacgaagttgtagcg
cctgctagtggtgagggtctcaagggtgagaagggtctcaaaagaaagctcgaggaagac
taa
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