Varroa jacobsoni: 111269937
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Entry
111269937 CDS
T07417
Name
(RefSeq) uncharacterized protein LOC111269937 isoform X1
KO
K27498
focadhesin
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111269937
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111269937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3730
Motif
Other DBs
NCBI-GeneID:
111269937
NCBI-ProteinID:
XP_022705594
LinkDB
All DBs
Position
Unknown
AA seq
1791 aa
AA seq
DB search
MDLLETISSPPIQQKYMERIRSQIICLLQGKKYNATTQPRLPVLDKILSSTVSSSLSLSQ
SCCDLLETLVNEGFVESKYASQQLHAVIACSLDSTDSSTVAHISPAFSLLPRVHPVTSFT
HPLIFLLNEYPMVWPYVSCILEAWLKERNDLQRFERSVSRMAAEEVTLQTRNSLRFEEIQ
FIVLDIMLRAEWPIEHALLRMRINQLLLSDFSRWRSLINLYTRWLPGSVPSVHLLQLGQL
LSDNLGSLGGLSSLVAALVFLRDAATKKDADFSFVIFTALQIASNLKEGDQSSHPCVTLL
LCVLLTTCGRLYGLLLLELARILFYKRLLPGVHHLALSLCHSAVAGHPTARKIILDIKNE
GYGDSKDAYVGFMCSKSLRTVPSDLLPSLMMYDDDDGKTKAAVPRNIPSSLRGLLVAGKV
VACAGPQLPSWIRILKALCCADSNNSCLAFFAIGMRLDAEMFPKNIFSLLESLPHIATSK
MSAVLIRNMLIAMWSGGVSGASAVSLSSLAVVLLSRLYVRHNALILPTLLRVISSGSEDV
QPSLALAVAKAQAIKTVIQHSPWLHGCDMLPWLCRLMTVRSPEMTAIFPLCLDGVRTLIE
CKVVTLSSFIEKFSECFFTDSRPQVRAAFYELIGHSILRGTSEGELIAYQRKLWVSFFDQ
NEHNIVRASCLDALAYFPEISIAALPEKEVCKLRLTLEFSSLNSSEEGSLAVPASFFTVG
PVANICSHSNSALLQKAFSNFISTRIRHEVRCLPRSAITVREVHQSSRSIQQIRTYSSSL
AQIPRLQQSLFHQNAHDIQPQAAAGLLLTYNPPVKTDQGGAASKNAMIQHSNSFLAMFRS
LLETVPLFNAKEWFMSLTCLPQWHLLVERAFVSLTNARKAESGSNEQSKLLASLWARDQL
SAVAAEVGSGNGLIAICSLVSLTYEYEKTLKLKERLQMDSQHLYNILGVKDHKYLSHAEW
PVRALRSLLCLIQRRPIDDAYFAQLLAKFTRSASSTEKAIGAILFSLHQMLPLLQSQGLL
RDALKCFSIKAQHQEFLAAVGAGLMIQKCMFHGIFEVAEDVRRICEDIVQKLEAWALDGK
SGTVTSPSYLFGTTLAMSSLCALRMFQSPARSFCARIVALLGVSSPLTLKPTLGPVSSGA
VTQTRQPVLSSSSSDSRWTSHENDFDYLDEIALCCAVMAINGRQFVLKSCAGQDRYGNDG
DVGEQKSLRDLAEWLTQRRAQVPMNAGVAIALGLILHNMAQCDAATKTLLSQQRIGQLQD
QITGAHDPASRTKAGHIESHRLVEALLTKVWLPVVANAHESNGHKIAAVEGIAALTGALD
HLIVQSAELPDRNVWCESNVLTHDVTLTLLDAMIRDVNTMPQNVSNTATLKAHHIWTLGL
FHRALTRTCGVDPVASYPPILNLGSNDRASSLLAETVTAADKDMTAFGLLVDGLGQSFDS
PLPCFAWIQLRQHLYNRGTQGAQIQRALVILAVENAKLTPSLVPLLEAIISSAVLDVLEE
FCKNFLLDRLRLVLEVCDPSKIGPFLSLYKDQRVNSEDIQVAEEAWKLLASYLENSAANS
TLVYLIQEMICYALPSCKARHYVAACLINFRDVTLRDLILKSLLAQEKLTLKRALELRMT
LAGVIEMADVENPFTFIGAMSNSEFTEFSIECASVNCAGPVVENSVKWLLEILPRGQPSC
RSLTLLSLIANMMIQPSDWEDGRIEISRTEQQIMLLLPYRIDQMMRSKIWGTAAVEHILQ
WLISVLENTSPSNDTYAVLHDTLMALRDKPVLRNNRTMWTRAVKLTLPSSI
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atggaccttttagaaactatttcatcaccaccaatccagcagaagtacatggaaaggatt
cgatcgcaaattatatgtttgctacaaggaaagaaatataatgcaactacacaaccgcgt
ttgcccgtcctggacaaaattttgtcttcgaccgtgtcttcatctctgagtctatcacag
tcgtgctgcgatttgttggaaacgcttgttaacgagggtttcgtggaaagcaaatacgcc
agccagcagcttcatgctgttattgcatgttctttagactcgacggactcctcaacagtt
gctcacatctcgccagcgttttcgttactgcctcgagtgcatccagtcacatccttcact
cacccactcatctttcttttaaatgaataccctatggtgtggccctatgtttcctgcatt
ttagaagcttggttgaaggaaagaaatgatttgcagcgttttgaaagatcagttagtcgc
atggcagctgaagaagtgacactacaaactagaaattcactgcgattcgaagagatccag
tttattgtcttggacatcatgttgcgagctgagtggcctatagaacatgcactattaaga
atgagaatcaatcaattgcttctaagtgactttagccgttggcgatcgctgataaatctc
tacacacgttggctgcccggttcagtaccatcagttcatctactccagctgggccaactg
ttgtccgataatttgggttcacttggagggctctcctcgttggtagcagctctggttttc
ctacgagatgcagcgacgaagaaagatgccgatttctcctttgtaatatttacagcgctg
caaattgctagcaacctcaaggagggagaccaatcgtcccacccttgtgtcaccttgctc
ctttgtgtgctcctgacaacctgcggtcgtctctatgggctgcttctccttgaactagcc
cgaatcctcttttataaacggcttttaccaggagtacatcacctcgcactttctctctgt
cactcagctgtagcgggacatccaacggccagaaaaattattttggatataaaaaacgaa
ggttatggggactcgaaagatgcctatgttggattcatgtgttcaaagtctttacgcaca
gttccaagtgatcttttaccctcattgatgatgtatgatgatgatgatggaaagacaaaa
gcagcagttccaaggaatattccgtcttcgcttcggggcctactggtagctggaaaggtg
gtcgcgtgcgctggaccgcagcttccgtcttggattcgcatccttaaagctctctgttgc
gctgattctaataactcttgcctggcgttcttcgcgatcggtatgcgtcttgatgcagaa
atgtttccgaaaaatattttttctctcttggaatcgttacctcatatagctaccagtaag
atgtctgctgtattgatccgcaatatgcttattgccatgtggagtggcggtgtatcggga
gcttctgcagtctcactctcgagtttagccgtcgttttgctttcacgcttgtacgtgcgt
cataatgctttaatactacctaccttgctccgtgtgatcagtagtggctctgaggatgtt
cagcctagcttggcgcttgctgttgcaaaagctcaggcaataaaaaccgtcatacaacac
agcccatggttacacggctgtgatatgcttccgtggttgtgccggttgatgactgtccga
tcgccggaaatgacggctatatttccgctgtgtttggatggtgttcgtactttaattgag
tgcaaagtcgttactctgtcgtcatttatagagaaattttccgaatgcttcttcaccgat
tctaggcctcaggtcagggctgcgttttatgaattgatcgggcactcgatcttgcgtggc
acttctgagggtgaattgattgcataccagagaaagctatgggtatccttcttcgaccaa
aacgaacacaacattgtaagggcatcatgtcttgatgcgcttgcttattttcccgaaatt
tcgatcgcagctcttcctgaaaaggaggtttgcaaactccggctgacgcttgagttttca
tcactgaactcgtcagaggagggttctttagctgtaccagcatcgttctttactgtaggc
ccggtggccaacatctgcagtcattcgaactctgcgcttctacagaaagccttctcaaat
tttattagtactcgtatacggcacgaggttagatgtttaccaaggagtgccataacggtt
cgtgaggttcatcaatcatctcgaagtattcagcagattcgtacctactcctcaagtctt
gcacagatcccgagactgcagcagagccttttccatcaaaatgctcatgatatccaaccg
caggccgccgctggcctcctgctaacatacaatcctccagtaaaaactgaccaaggcgga
gcagcaagtaaaaacgctatgatacaacattccaactcgtttctggcgatgttccgatct
ctacttgaaaccgtgcctctttttaatgcaaaagaatggtttatgtcgctcacctgtcta
ccacagtggcatttgcttgttgaaagggctttcgtgtctttaaccaatgctcgtaaagcg
gagagcggcagcaatgaacaatcgaaactacttgcctcactatgggcccgcgaccaatta
agcgccgtcgcagcagaggttggctcgggaaatggtctaattgccatatgctctctcgta
agtctcacgtacgagtatgagaagactttgaaactcaaggagcgacttcagatggatagt
caacatctatacaacattcttggcgtcaaagatcataaataccttagccatgcggagtgg
ccagtcagagcacttagaagccttctttgccttattcagagaaggcccatagatgatgca
tactttgcccaactgctggcgaagtttacacgcagcgcatcatcaacggagaaggccatt
ggcgcaatattgttttcgcttcaccaaatgttgccgctgctgcaatcgcaaggcttgctt
cgtgatgcccttaaatgcttttcgattaaagctcaacaccaggaattccttgctgctgtt
ggggcaggtttgatgatacaaaaatgcatgtttcacggaatctttgaagtagctgaagat
gttcgaagaatatgtgaggacatcgttcagaaactggaggcatgggctcttgatgggaaa
agcgggacggtgaccagcccatcgtacctgtttggaacgactttggcaatgagcagtttg
tgcgctcttcgtatgtttcaatcacctgcacggtctttttgcgctcgcattgtcgctctt
cttggagtgtcttcccctctgacactaaagccaactcttggtcctgtgtcgtctggcgcc
gtcacgcaaacgcgtcagcctgtcctttcatcgagctctagcgattctcggtggacgtct
cacgaaaacgactttgactatttggacgagatagcactgtgctgcgctgtaatggcaatc
aatggaagacaatttgttttaaaaagttgcgcaggccaagacaggtatgggaatgatgga
gatgttggtgagcagaaatctttgcgcgatttggcggaatggttaactcagaggagggcg
caagttccaatgaacgctggagtggcaatcgcgcttggtcttatattacacaatatggca
cagtgtgatgctgctactaaaacactcctatcacaacaaaggataggacaactacaagat
cagataactggtgcacatgacccagcctcgaggacgaaagctggacatattgagagtcac
cgtctggtagaagccctactaacaaaggtgtggttacctgtggttgcaaacgcccacgaa
tcaaatggtcacaaaatcgcggccgtcgagggtattgccgctcttaccggagctctagac
catctcatagtgcaaagcgccgaacttccagataggaacgtatggtgtgaaagcaatgtg
ctcacccacgacgttaccttaaccctccttgatgccatgatccgtgatgtaaatacgatg
ccgcaaaatgtatcaaatacagcaactttgaaagcccatcatatttggacgcttggtttg
tttcatcgggcgttaacgcggacctgcggcgtagacccagtagccagctaccctcctatt
ttgaatcttggctccaacgacagggctagttcacttctcgctgaaacagtcacagctgca
gataaagatatgacagcctttggactattggtggatggtctgggtcaatcgtttgattct
cctctcccttgcttcgcatggatccagttgcgacaacatttgtacaaccgcggtacccaa
ggcgcgcaaattcaacgggctcttgtcattttggctgttgaaaatgccaaattaactcca
agtttagttcccctgcttgaggccattattagctctgctgtacttgacgtacttgaggag
ttttgcaaaaacttcttactggaccgcttgagacttgtgctggaggtttgcgatccaagc
aaaattggcccttttctttcactttataaggaccaaagggttaacagtgaagatattcaa
gtagccgaggaggcctggaaattgcttgcatcgtaccttgaaaattcggcagccaattca
acattagtatacctcatacaagagatgatttgctacgctctgccgtcttgtaaagcgcgc
cactatgttgcggcatgccttatcaacttcagggatgtaaccctgcgtgatctcatactg
aaaagcctgcttgctcaagaaaagctgacgctgaagagggctcttgagcttcgtatgact
ctagctggcgtgattgaaatggcagatgttgaaaatcctttcacgtttattggcgcgatg
agtaacagcgagtttacagagttttctattgagtgcgcatctgtcaattgcgctggtcct
gtcgtcgagaattccgtgaagtggttactcgagatccttccacgtggacaaccttcttgc
cgttcgttgactctactttctttaattgccaacatgatgatccaacctagcgactgggag
gatgggagaattgaaatatccaggacagaacaacaaataatgctcctgcttccctataga
atagaccaaatgatgcgaagcaaaatttggggaacagctgccgtggaacatatattacaa
tggttaatctcagttttggaaaacacctcgccatcgaatgatacgtacgcggtacttcat
gataccctcatggctctacgggataagccggtcttgaggaacaatagaacgatgtggacc
agggccgtaaagctgaccttacctagctcaatttag
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integrated database retrieval system
