Varroa jacobsoni: 111269999 Help Entry 111269999         CDS       T07417                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism vja  Varroa jacobsoni Pathway vja04512   ECM-receptor interaction vja04518   Integrin signaling Brite KEGG Orthology (KO) [BR:vja00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111269999    04518 Integrin signaling     111269999  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:vja00536]     111269999 Glycosaminoglycan binding proteins [BR:vja00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111269999 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd FnI_RECK CFC Motif Other DBs NCBI-GeneID:  111269999 NCBI-ProteinID:  XP_022705702 LinkDB All DBs Position Unknown AA seq 1494 aa AA seqDB search MAWRVSGCHLLWLVIATAAFYTALAAPQGADEEEYAEYDEAETSLPEEHSGTVESEPGIE MCLWNGETFVDGQEWRPDLCTVCRCIAGQQVCSPQECPKLPPCRGRTIVPQGECCPICIE DPEPTSEPPPVTEEIAYVGPRGPPGEPGIPGRPGEQGTPGEPGFHGQPGLPGPPGPVPDL GKWFTEQRALSGATGEKGPVDFQYMQASVGPTGPRGPTGPPGPPGPQGFQGVRGEPGEPG PPGSTGPPGERGPAGPTGKDGEAGEDGKPGAQGPPGTQGPRGLPGLPGLPGPKGHRGYPG LDGQKGELGATGEKGSPGPQGKIGPVGPIGPAGIRGERGREGPAGPPGIRGTDGQMGPPG PPGSAGRPGPPGFPGAPGMKGDAGAQGPKGSTGLQGPRGESGRPGTPGEPGPMGPTGKDG SAGEKGARGDSGVAGVPGFPGPRGPPGLSGSPGVPGPKGAPGQPGQSGHKGESGPKGETG ATGPRGLLGPQGAPGKRGKSGAQGPPGPVGPQGERGVPGPRGLPGPDGLPGQKGEQGALG AQGPIGPKGSQGDNGKPGLPGLQGLRGTPGTPGLPGKDGALGERGLPGADGKAGEPGQQG MQGLPGPTGLPGMKGEQGEPGLDGKQGPRGPQGPRGDTGKEGPMGPAGLPGKPGEMGMRG PPGSQGARGFQGLPGVPGNPGAPGKDGIPGIAGPPGLPGATGARGERGFPGETGKQGVQG PQGDRGEPGPAGQDGARGPTGEKGAKGHQGPPGLVGLPGRRGDIGSMGPKGERGDHGPPG PEGPMGRPGEPGVQGPVGPIGHTGEPGIKGGSGPTGPIGPTGAPGQVGARGPIGPPGPIG FQGPLGPPGPTGPKGNNGAPGPKGEQGEIGPQGSPGDAGPPGPLGLSGPKGPRGEPGTKG DIGIPGLIGRPGEMGRPGEIGLPGLPGPIGLPGIKGTTGEPGRPGLQGAQGNPGPIGPQG IKGETGAEGPVGQTGPLGPPGPHGERGVPGLPGLQGPKGPMGPRGPQGERGQEGKPGGDG PPGSAGPQGIQGPPGPQGERGLIGSPGKQGPPGIAGRPGDKGPQGAAGAQGPPGPPGLIG APGPVGQRGPSGDHGEKGDTGPMGVGGPQGPRGPPGVAGLQGSKGDRGEPGDRGLKGHRG LAGLQGLPGPPGAPGERGTPGGAGTTGLPGPAGPRGAPGRDGAMGPQGVQGAPGPRGPPG ENGKPGIPGAAGPPGPPGPPGEPFGYDPAALQAILGKPHTKGPDPMIGDDARVLFDDKAS IEDKKKIIFEYYKKLVEEYDRIRNPVGTKDAPAKTCRDLSISHPDFKSGMYWIDPNEGDS RDAIQVYCDMRVGASCITPSPKIVPNKAHYIGKPKHTWFSEMPGGSQFTYKIDRVQLTFL QMLSGRAEQNITYHCKNSVAYLDATKGNYRKAVKLLSGNDLELKPHGDNVSANNKFTFTA AYDGCKDRKSSWDQTMLTFKSDKPNRLPVVDIAPKDIGGRQQQFGLEIGPACFL NT seq 4485 nt NT seq  +upstreamnt  +downstreamnt atggcgtggcgcgttagcggctgccatcttctttggctcgtgatcgccactgccgcattc tatacggctcttgccgcaccgcagggagcggatgaggaggagtacgcagagtatgatgag gccgaaacgtcgctacctgaagaacattccggcaccgtcgagtctgaaccgggtatcgaa atgtgtctctggaacggcgaaaccttcgtcgatggacaggagtggcggcccgatctgtgt accgtgtgccgttgcatagctggacaacaagtatgcagtcctcaggaatgtccgaaattg cccccatgtagagggcgtaccattgtgccacagggcgaatgctgtcccatctgtatcgaa gatccagaacctacatcggagcctcctcctgtcacggaggaaatagcttacgttggtcca cgtggacccccgggagagcctggcatccccggacggcccggtgaacaaggaacacctgga gaacccggctttcatgggcagcctggattacctggtccgcctggtcccgttccggatctc ggcaaatggtttacagagcaacgtgcgctgtctggagccaccggagaaaaaggacccgtt gacttccagtatatgcaagcctcagtaggacccacaggccccaggggacctacgggtcca cctggtccacctgggcctcaaggctttcaaggagtgcgtggtgagccaggtgagccaggc ccaccgggatccacgggacctcccggagaaaggggtcctgcaggacctactggcaaagac ggagaagctggtgaagacggcaaacctggcgctcagggtcctcccggaactcagggccca agaggtttaccaggattaccaggacttccgggacccaaaggccatcgcggctatcctggg cttgacgggcaaaaaggagaactcggagcgacgggtgaaaagggatcacccggacctcaa ggcaaaattggaccggtcggacctattggcccagctggaattcgtggagagcgtgggcga gaaggtccggcaggtcctccaggaattcgtggcacggacggccaaatgggcccacctggt ccaccaggctcagcaggccgaccaggaccacctggttttcctggagctccaggaatgaaa ggagatgcgggagctcaaggtcctaaaggaagcactggacttcaaggaccacggggagag tctggccgaccaggaactcccggagaacctggaccaatgggtccaactggaaaggatggt tcagctggtgagaagggtgctcgcggtgattctggagtagcaggtgtacccggattccct gggccacgaggaccgccaggtttgtcaggaagtcctggcgtacctggaccgaaaggagcc cctggccagccaggccaatcaggccacaaaggtgaatcaggaccaaaaggagaaacagga gcaactggcccacgaggattgctcggaccgcaaggagctcctggaaagaggggtaagagc ggtgcacaaggacctcccggacctgtagggcctcaaggtgaacgaggtgtgcctggccca aggggactcccaggtcctgacggacttcccggacaaaagggtgagcagggtgctcttgga gcgcaagggccaatcggacctaagggctctcaaggagacaatggcaagcctgggcttcct ggactccaaggccttcgaggtacaccgggtacacctggtctgcccggaaaagatggagct cttggagaaaggggccttccaggtgctgatggaaaagccggcgaacctgggcaacaggga atgcaaggccttccaggacctacagggctcccgggaatgaaaggggaacagggcgagccc ggtttagacggcaaacagggccctcgtggaccacaagggccacgtggagacactggaaag gagggtcctatgggaccggccggattaccaggaaaacctggggaaatgggaatgagaggc cccccaggatcgcaaggggctcgaggattccagggactcccgggagtccctggcaatcca ggtgcgccgggcaaagatggaattcctggaatcgctggtccacctggccttccaggagct acaggtgccaggggggagcgcggcttccctggcgagacaggcaaacagggtgtacaaggc ccacaaggtgatcgtggtgaacctgggcctgcaggacaggatggtgccagaggtccaact ggagaaaagggcgctaaaggacaccaaggccccccaggtcttgttggactccctggtcgt cgtggtgacattggatcaatgggtccaaaaggtgaacggggagaccatgggccaccaggt cctgaaggtccaatgggccggccgggagaaccaggtgtacagggtcccgtcggacctatc ggacatacaggcgagcctggcattaaaggcgggtcaggtcccactggaccgattggccca actggagctcctggacaggttggcgctagaggccctattgggcctccaggacctatcgga ttccaaggtccacttggtccccctggacctactggaccaaaaggtaacaacggagcacca ggtcctaaaggtgaacaaggcgagatcggcccccagggctcccccggtgatgccggacct cctggaccccttggcctttcaggacccaagggccctcgcggggaacctggtaccaaggga gacatcggaattccaggtcttatcggtcggcctggtgagatgggaaggcccggagagatt ggattgcccggtctaccgggaccgataggccttccaggaattaagggaacaaccggtgag cctggtaggccaggtcttcaaggcgcacagggcaatcctggacctattggtcctcaaggt attaaaggtgaaaccggtgctgagggtcctgtaggtcaaaccggacctttgggtccccct ggtccacacggagagcgtggcgtaccaggtttgcccggccttcaaggtcctaaaggtcca atgggacctcgtggacctcaaggagagcgtggtcaagaaggaaagccaggaggagatgga ccaccaggatctgctggacctcaaggtatccagggaccacctggacctcagggtgaaaga ggactcattggaagccccggcaaacagggtccacctggtatcgcgggccgtcccggtgac aagggacctcaaggagcagcaggagcacagggaccgcctggaccacctggtcttattggc gccccaggacccgttggtcaaagaggcccatccggtgatcatggagaaaagggggacact ggtcccatgggtgtaggtggtccccagggacctcgtggcccgcctggagtagccggttta cagggcagtaagggagaccgcggagaacctggtgatcgtggacttaagggtcatcgaggt ctcgctggtttgcaaggacttcctggaccacctggagctccaggagagcgcggaactcct ggaggtgcaggaactaccggacttccaggaccagctggcccaagaggtgcacctggaaga gacggtgcgatgggacctcaaggagttcaaggagcaccaggccctcgagggccccctgga gaaaatggcaagcctggtattcccggagctgctggtcctcctggaccccccggacctcct ggagagccattcggatacgatcccgccgcccttcaggctattcttggtaaacctcacacg aagggcccagatccaatgatcggcgacgacgcacgcgtactattcgatgacaaagcttca attgaagataagaaaaaaatcatctttgagtattacaaaaagcttgtcgaggagtatgat cgtataagaaaccccgtcggaacgaaggatgctcctgccaaaacatgtagggatctctcg atttcccatcctgacttcaagagtggcatgtattggatagatccgaatgaaggggattcg cgcgatgctatccaggtttactgtgacatgcgtgttggggcgtcttgcattacaccttca ccgaagatcgtaccaaataaggcacactacattggcaaaccaaaacatacctggttctct gaaatgccaggcggaagtcagttcacgtacaagatcgaccgcgtacagctgacattcctg caaatgctaagcgggcgtgccgagcagaatatcacgtaccattgcaagaactcagtcgcc tacttagatgccaccaagggcaactacagaaaagcagtgaaactgctttctgggaatgat ctcgaactaaagccccatggggataacgtatctgcaaacaacaaattcaccttcactgca gcatacgatggttgcaaggatcgcaagagcagctgggatcaaactatgcttacttttaag tcggacaagcccaacaggctgccggttgtggatatcgcccccaaggacatcggaggacgt caacagcaatttggcctcgagatcggcccggcctgtttcctttag

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