Varroa jacobsoni: 111270081
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Entry
111270081 CDS
T07417
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vja03009
]
111270081
Enzymes [BR:
vja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111270081
Ribosome biogenesis [BR:
vja03009
]
Eukaryotic type
Pre-60S particles
Helicases
111270081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
111270081
NCBI-ProteinID:
XP_022705838
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MAGDVRTLEFHEMGLDERIVKAIAALGWRQPTAVQEHAIPLALKGKDILARARTGSGKTA
GFAIPAIQKILERRLKGCDQETTVLVLAPSKELCKQIYRHFVALTRYCTGQVRVVDVSEF
SQLSVLRPQLIERPDVVIGTPAKVLAHSKAENLILDSVEMLLIDEADLVFAFGHEKDTEQ
LLTNLPTIFQAIVSSATLSEDVLALKRLVLHNPVTLRVEESSLTDNPGLTQYVVKCEELD
KYAILAALFKLNLIKGKTLIFVNSVDRGYRTKLFLDQFGVRSCVLNSELPLTSRQVVIDR
FNEGRYEIIVASDDKSLDARKASSKKDGNKRRSGIDREFAASRGLDFQFVSNVINLEFPM
SIQAYIHRVGRTARANQKGTALNFVSMREMPLYEAVEAKMVEEKRNMFQAYRFKIDEIEG
FRYRAQTALNQLQKRVIKEARIKDIKEEMLKSAKLKTFFEENPREHSLLRHDKAARATTV
KYHGLKHVPDYIIPPTLQRIMQMSNRKRPRITTEEGSAVRSSAWEPVCKRASKRGKAFPQ
NNNKQNKDPLKSFSFKP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgacgtccgcacactcgaattccacgagatgggacttgacgagcgcatcgtt
aaagcaattgccgcacttggctggaggcagccaactgctgttcaggaacatgcaataccg
cttgcacttaaaggtaaagatatccttgcaagagcaagaacgggttcgggcaaaactgct
ggttttgccattcctgctatccagaagatacttgaacgtcggttgaagggttgcgatcag
gagacgacagtattggtgttagctccaagtaaggagctatgtaagcaaatctacaggcac
tttgtagccctgacacggtactgtacaggacaggtacgagttgtggacgtgtctgagttt
tcacaattatcagttttgcgaccgcagctaatcgaacggccagatgtggttataggcacg
ccagcaaaagttcttgcccactcgaaagccgaaaaccttatattagactcggttgagatg
ctgctgatcgacgaagctgaccttgtgtttgcttttggccacgaaaaggataccgaacag
ttgctcacaaacctaccaactatattccaagctattgtatcatcagctacgttaagcgaa
gatgtgctagcgcttaagcggctcgtattacataacccggttacactacgggtagaagaa
agctcccttaccgacaatcctggccttacgcagtatgtagtgaagtgcgaggaactggac
aagtatgcgattcttgcagctttattcaagctcaatctaatcaagggaaaaacgctgatt
tttgttaactcggtagatagaggttaccgaacgaagctattcctcgatcagttcggtgtt
cggagttgtgtgctcaatagtgaattgccacttacgtcgagacaagtggtcatcgatcga
ttcaacgaaggtcgttatgagattattgtggcatctgatgacaaatcattggatgcgagg
aaagcttcaagcaaaaaagatggaaataaaagaagatcaggtatagatcgagaatttgct
gcaagtcgtggtctcgactttcaattcgtatctaacgttatcaacttggaatttcctatg
agtatccaagcgtatattcatcgcgtcggccgtacagctcgtgctaatcagaagggaaca
gccctcaattttgtctctatgcgcgaaatgcccttgtacgaggctgttgaagctaagatg
gtagaagagaaacggaacatgtttcaggcgtaccggttcaagattgatgaaattgaagga
tttcgttatcgcgctcagacggcacttaaccagttacagaaaagagtcataaaagaagcg
cgaatcaaggatatcaaggaggaaatgttgaaaagcgccaagctaaagacgttctttgag
gagaatccccgagaacattcgcttcttcgacatgataaagctgctcgggcaacaacagta
aagtatcacggactcaaacacgttccagactatatcatccccccaacattacaacgtatt
atgcagatgtccaatcgaaaaaggcctcgaataacaactgaagaaggcagtgctgtcaga
tcaagcgcttgggaacctgtatgtaagagagcttcaaaacgagggaaagcgttccctcaa
aataacaataaacagaataaggatcctttaaaaagtttttcgtttaaaccttaa
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