Varroa jacobsoni: 111270104
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Entry
111270104 CDS
T07417
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vja04121
]
111270104
Enzymes [BR:
vja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111270104
Ubiquitin system [BR:
vja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111270104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-ANAPC11
WD40
zf-RING_5
zf-C3HC4_3
Beta-prop_SPT8
EIF3I
zf_RING_Vps8
WD40_Prp19
bZIP_1
Prok-RING_4
zf-UDP
zf_RING_Vps8_fungal
Beta-prop_EML_2
zf-RING_16
zf-Nse
Motif
Other DBs
NCBI-GeneID:
111270104
NCBI-ProteinID:
XP_022705877
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MDNSDWLFLNEEELNDLQSAIQLNPSSTVRGTNAREQDEPGGSGNNVEQPRGSQSSRRSA
AAPRRSESAETDGTSATGGRYAQILSGERVLVDRRGAMGDEQGRIGRSRRGAANRNGRTA
APNGEGPAGADRFVINSTQWEHRSSRATASARNTRSRRGTSQLLSPSQNPRRSPAEPASR
SDVGTLETEEIDGDTEGDDEARWELPPSRGVGRGTRSSTGTRSRSTRATSRLVEEFLSDD
DSDSTNPLGVEPAFLNELDAVAAEMDAIFSDEATISDDDELTFDEEDDDFLPAINVSGLQ
GLRVIVEELSNQEMARRGGANPIDISSDEDTEEQRREWRRRGVDTANARRRAAANVAADA
EEQAAQATAPSQGSRRNERIVSRQHDARGNSGNDNSNSNNNDKDDEDSQGPSKRCRLDPD
VKNARLAEKEDDINRVATCSICLDDMNQGGDHRLVVLKCGHCFGESCVKRWLMSGKRSCP
MCNRQASLKHMRVAFLDCHRLGESYELAEARKEIDDLRYREQKSCDQVRELNFRVEALVG
QNALLNERVRQLEKGAHVNQPYLGQSSNELGGFPKTQSFTKLSGHCKYMAYSDKLGLIAV
SAKPVTPFFEGFSVELCSLYDLKSRRAKLLHTHEIKDLDFHQNKLWLLTASLDNSARISS
VDNLGLANVHTLQLHNKVWSACWSNASDTNFYLGLQNGDIVEYDVRTLRDPVQVLRGPSN
NMIPIVSLKSITVNQERREVHGLACSQLRNAIRIYTEIGPNRYQAQNIPTAGNCFSLSYY
APNETLLVNSRTFSGSQGLKGVTNEVFCLDGRNGDTVVSAKCKFQSGGSSSVITKPAIVT
SPTGELWACCLDDQAKTIQVFSCNDASLRLTLKSQDPLAKQFTQAERISLRGRSEYALAG
LSDGGLTIFA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggataactctgattggttgtttttaaatgaagaggagctaaacgatttacaaagcgcg
atacagcttaatcctagttctacagttcgaggcacgaatgctcgagagcaggacgaacct
ggtggtagtggaaataacgtcgaacagccgcgaggttcccaatcatcacggagatcggca
gctgctccaagaaggtcagaatcagcggagaccgacggaacttcagcaacgggggggcgt
tacgcacaaattttatcgggagagagagtgttggtagatagacgaggcgctatgggtgac
gaacaaggtcgcattggtcgttcgagacggggagcggcaaatcgcaatgggcggacagcg
gctcctaacggtgagggtcctgcaggtgcggaccgtttcgtgatcaactcgactcaatgg
gagcatcgaagtagtcgggctacggcaagcgcccgcaacacacggagtcgacgtggtact
tcgcagttactctcgccatcacagaacccgcgtagatccccagcggagccggcgtctcgt
tctgatgttggaaccttagaaacggaagaaatcgatggtgataccgaaggtgacgacgaa
gctcgatgggagcttccgccgagtaggggggtaggccgaggtaccagatcgtctacgggg
actcgatcgagatcgacaagagcgacttcaagacttgttgaagagtttttgtccgacgac
gacagcgattccacaaacccgctaggcgtcgagccggccttcctcaacgagctcgacgcc
gtcgcggcagaaatggacgcaatcttttccgacgaggcaactatttctgatgacgacgag
ttgacatttgatgaagaggatgacgattttctgccggcgatcaacgtgtcagggttacaa
ggacttcgggttattgtggaggaattatcgaatcaagaaatggctcgacgcggtggggca
aatccgatagacatttccagtgatgaagataccgaagaacagcggcgagaatggcgaaga
cgtggagtggatacagcgaatgcacgaaggcgtgcggctgccaatgtagctgcggacgct
gaagagcaggctgcccaggccactgcgccgtcgcaggggagccgtagaaatgaaaggatt
gtctccagacaacacgatgctcgtggtaacagtggcaacgacaacagcaacagtaacaat
aatgataaagatgacgaagattctcaaggcccatcgaaaagatgccggctggatccagat
gttaaaaacgcacgacttgccgagaaagaggatgacataaaccgggtcgcaacatgctcg
atttgtctcgatgacatgaaccagggtggagatcacagacttgtcgttctcaaatgcgga
cactgttttggcgaatcgtgcgtgaaaagatggctcatgtccggtaagcgttcctgtcct
atgtgtaatcgtcaagcttccttgaagcatatgcgtgtcgccttcttagattgtcatcga
ttaggcgaatcatacgagttagccgaggctcgtaaagaaatcgacgaccttcgctaccgc
gagcaaaagtcatgtgatcaggttcgcgagcttaacttccgagtcgaagcgttggttggg
cagaacgcgttgctgaatgagcgtgttcgtcaacttgagaaaggtgcacatgttaaccaa
ccttatctcggccaaagctcaaacgaacttggcggtttccctaaaacacagtccttcacc
aagctgagtggccattgtaaatacatggcgtattcggacaagttaggcctaatagctgtt
tcggctaagccagtcactccattttttgaaggtttttcagtcgaactttgttccctgtac
gatctgaaatcacgtcgggcgaagttgctacacactcatgaaataaaagacctcgatttt
catcaaaacaagttatggctgctaacagcttcgctagataactcggcacgaattagcagc
gtcgacaatttaggcctagcaaatgttcacacgctgcagttacacaacaaggtgtggtcc
gcttgttggagtaatgcatcagatacaaatttttatctgggcctacagaatggtgatatt
gtcgagtatgacgtgcgcacgctaagagatccggttcaggtcttgcggggtcctagcaac
aatatgatacccattgtctcgttgaagtccatcaccgttaaccaagaaagaagagaagtt
catggcttggcatgttcccagctgcgcaacgcgattcggatttatacggaaatcggcccg
aaccgttaccaggcgcaaaacatccctaccgctggcaactgcttttccctctcttactac
gccccaaacgagactctcttggtgaacagtcgcacgttcagtggctcgcaaggcttgaag
ggcgttacgaatgaggtattctgccttgatggacgcaatggtgatacggtggtgtcggcg
aaatgcaagttccagtcgggtggcagctcttcagtgatcacaaagccggcaattgtcaca
tcaccgactggtgaactctgggcgtgctgccttgatgatcaggccaagaccattcaggtg
ttctcctgcaatgatgcttcgcttcgactcacattgaagtcacaagatccattagccaaa
cagttcacgcaggccgagcgaatctctctacgtggaagatcggagtacgccctggctggg
ttgtcagacggtggcctcacaatttttgcttaa
DBGET
integrated database retrieval system
