KEGG   Varroa jacobsoni: 111270216
Entry
111270216         CDS       T07417                                 
Name
(RefSeq) retinoblastoma-binding protein 5 homolog
  KO
K14961  COMPASS component SWD1
Organism
vja  Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:vja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vja03036]
    111270216
Chromosome and associated proteins [BR:vja03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     111270216
    COMPASS/SET1 complex (yeast)
     111270216
    MLL-HCF complex
     111270216
    MLL3/MLL4 complex
     111270216
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40 WD40_CDC20-Fz EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR75_2nd NBCH_WD40 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_LRRK2 Beta-prop_TEP1_C Beta-prop_WDR11_1st WDR54 Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 PROPPIN VPS8_N
Other DBs
NCBI-GeneID: 111270216
NCBI-ProteinID: XP_022706050
LinkDB
Position
Unknown
AA seq 521 aa
MNLDLLESFGQNYPEEFDGTLDCISLAITCTFNRYGTLLAVGCNDGRIVLWDFLTRGIAK
IITAHIHPVCSLSFTRDGRKLVSASTDNTVCVWQVLTGDCLQKYTFPSPVLKVQFHPRNE
RLFLVCPLKYAAVLVDCSTREHRLVPLDDDTDLNIVASFDRQGEHIFTGNAKGKVVVVRV
SDLEVVVSFRVTTGSQSATAIKSIEFSRRGDHFLCNTADRVIRVYDSRKVVERAGEDVDV
EPTQKLQDLVNKTTWKKCCFSGDGEFICAGSARQHALYVWERSVGNLVKILHGTKGETLF
DVVWHPVRPIIASISSGVVSIWAQAQVENWSAFAPDFKELDENVEYEERESEFDLEDEDK
SVQMEEESRDEEVEVDVETEEPVAAYCSSDEDGEAIKKALLYLPIAPDIDEPEEGWGGDG
PGIPSTPGILSDSGGGSGRNVHAYDVQLKDAPVGEPHPLVGNGKKNQVTAGKPKQPGQPA
SAASQSAKPPLKDRTKDKRFKRLKVHEDSSWDAEHVSNSPS
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgaatttagatttattagaatcgtttggacaaaattatccagaggaatttgatggaact
ctagattgtatttcgctggcaatcacttgtaccttcaaccgatatggcacacttttagct
gtcggttgtaatgatggtcgtattgtgctttgggatttcctgactcggggtatagcaaaa
attattacagcacatattcatcctgtctgctcgttgagtttcacccgggacggacggaag
ctcgtgtctgcttccacagataataccgtctgcgtgtggcaagttctaaccggtgattgt
cttcagaaatatacatttccgtcgcctgtacttaaggttcagttccaccctcggaatgaa
cggctgtttctcgtatgtccgctgaagtatgcggccgtattagttgattgctcaacgagg
gagcatcggcttgtgccgttggacgacgatacagaccttaacatagttgcatcattcgat
cgtcaaggcgaacatatcttcactggcaatgctaaaggcaaggttgtcgttgtacgggta
tcagaccttgaggttgttgtctcgtttcgggtgacaacaggatctcagagcgcaaccgcg
atcaaatccatcgagttctcacgtagaggtgaccactttctatgcaatacagctgatagg
gttatccgtgtttacgatagtcggaaagttgtcgaacgagctggagaagacgtagacgtc
gaacccacacaaaagcttcaggatcttgtcaacaagacgacgtggaagaaatgctgtttt
tccggagatggcgaatttatttgtgctggatctgcacgccagcatgcgctttacgtctgg
gaaagaagtgtcggaaaccttgtgaaaatcctacatggcacaaaaggagaaacgctattc
gatgtagtttggcatccagtgcgaccgataatcgcctccatttcgtcgggtgtcgtgtcc
atctgggctcaagcacaggttgaaaactggtctgcattcgcgcctgatttcaaagaattg
gacgagaacgtcgaatacgaagaacgtgaaagtgagttcgatctcgaagatgaagataag
tctgtacagatggaagaagaaagccgagacgaggaggtggaagttgacgtagaaacggag
gaaccagttgcggcgtactgttcatcggatgaagatggtgaagctatcaagaaagcccta
ctatatcttccaattgcgccggacattgacgagcccgaagagggatggggtggtgacggt
cctggaataccctccactccaggaattctgtccgattctggaggtggttcaggacgaaat
gttcatgcttatgacgtgcaattgaaagacgcgcctgttggagagccacatccgctcgta
ggtaacggaaagaagaaccaagtcactgctggaaaacctaaacagcctgggcaaccagcc
tcggccgcatcgcagagtgctaagccaccgttaaaggaccgcaccaaagataagcgtttc
aaacggttgaaagttcacgaggattcgtcatgggatgctgaacacgtcagcaattcaccg
tcgtag

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