Varroa jacobsoni: 111270218
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Entry
111270218 CDS
T07417
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2-like isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vja03009
]
111270218
Ribosome biogenesis [BR:
vja03009
]
Eukaryotic type
90S particles
Other 90S particles
111270218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IP5PC_F
Beta-prop_WDR75_2nd
NBCH_WD40
Beta-prop_Vps41
KNTC1_N
VPS8_N
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
111270218
NCBI-ProteinID:
XP_022706052
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MSFFIKANRGRKRNDKHGKSGTRSRKFAALPPPVKKSKRDLEISSDEDEIEDDSYGTLRL
GEAEGNASDSTKSDSDAEVEETAEQKKLRLAKAYLDEERRKQAENDVDEELKHNLIAHRL
KRDLLGQAGRLFKPLARSIQTVQKDAIVRLKNQHRLPITRAVIGPDEKVLFSASKDGTLV
RCCLFDVGGSTSFTRSVDTESCQGRRTIRVKNAHDAAVLALALSSDGRFLASGCAKNVLT
IWNPDSLEKMHTFGTAQHRGKITGLAFRYGTHQLFSCSADRTVKLWNLDEMAYVETLFGH
EDTVTSVDSFIKDRALTSGGRDGTLRLWKIPEESQLVFQGNQSSADCCAMVNDDTFVSGH
DDGKVYLWKVMKKKPVASVTVSAPGEWITALSAVRSSDFVAAGSSCGYIALLMVVNSERG
SEGKPALEEVQRIQCIGFVNSLVFSASSRLLIAAVSQEHALGRWQRIKEAKNAVQVFPLK
YDTNYNQDKKAVLDKAALSDVRELIS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctttatcaaggctaatcgtggccgaaaacggaacgataaacatggcaagagt
ggtaccagaagcagaaaatttgctgccttgcctccgcctgttaaaaaatcaaaacgtgac
ctggaaatcagttccgatgaagatgagattgaggatgactcatatggtacgttgcggtta
ggcgaagctgaaggtaatgcaagcgattcaacaaaaagcgactccgacgcagaggttgag
gagacggcagagcagaaaaagcttcgtttagctaaggcgtacctcgatgaagagcgaaga
aaacaagcagaaaatgacgttgacgaggagcttaagcacaatcttattgcacataggcta
aaaagggatctgttggggcaggcgggccgtctcttcaaaccgctagctcgttcaattcaa
actgtacaaaaggacgccatagttcgtctaaaaaatcagcatcgtttgccaattacacga
gctgttataggccctgacgaaaaggtcctgttctctgcctccaaggatgggacacttgtc
cggtgttgtttgtttgatgtcggcggttctacctcttttactaggagcgtcgataccgaa
agttgccagggacgacggactatacgggttaaaaacgcgcatgatgccgccgttcttgct
ctggccctttcatcggatggacggtttctggctagtggctgtgcgaagaacgtgcttacc
atttggaatcctgattcgctcgagaaaatgcacacctttggcaccgctcagcatcgtggc
aagatcacaggtttggcatttcgttacggaacgcatcagctcttcagttgttctgcagac
cgtacggtgaagttgtggaacctggatgaaatggcgtacgttgaaacgttgtttggccat
gaagataccgttacatccgtcgatagcttcattaaagatcgtgcgctgacatcgggcgga
cgggatggaacgcttcgcttgtggaagattccggaagagtcacagctcgtattccaaggt
aatcagtcatcggctgattgctgtgcaatggtaaatgatgacacgttcgtatcaggccat
gacgatgggaaagtatatctctggaaagtaatgaagaaaaagcccgttgcaagtgttacc
gtttcagcccctggcgaatggattacagctttgagcgctgtacgatccagtgattttgta
gctgcgggatcgagttgcggatacatcgcactactcatggtggttaacagtgaacgcggc
tctgaaggcaagccagccctggaagaagttcaacggatccagtgcattggtttcgtaaac
tcattggtcttttctgcttcttcccgactgcttattgcagcagtatcgcaagagcacgcc
cttggtcggtggcaaaggatcaaggaggctaaaaacgccgttcaggtgtttcccttgaag
tatgatactaattataaccaagataagaaggcggttttggataaagcggccttaagcgat
gtacgagaattaatatcttag
DBGET
integrated database retrieval system
