Varroa jacobsoni: 111270722
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Entry
111270722 CDS
T07417
Name
(RefSeq) syntaxin-16-like isoform X1
KO
K08489
syntaxin 16
Organism
vja
Varroa jacobsoni
Pathway
vja04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111270722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vja04131
]
111270722
Membrane trafficking [BR:
vja04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
111270722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Syntaxin
Synaptobrevin
MCPsignal
DUF3618
DUF6221
Motif
Other DBs
NCBI-GeneID:
111270722
NCBI-ProteinID:
XP_022706835
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MAVKNLTDVYLLMRSNSARAKRSLDEFQDDVGDTVSLVSASGDAERGEWGGPRNRERRVL
QAPLWTDNLAEIKADIARIRHHLTELKRLHDKHLNRPSLLDEQDEESRIRAAQDEIGRLL
RDCQSHVAIINRWSQAKQSGWAERQLTDNVVRAVAGQLREVTELFRQSQTDYCNRIKQRN
NAGAFFDQTISLDEPPTDPAIMQSDMMFVTTQDLLTAEEVAQREEEIQAVVRSINELNVV
FKEVARLVVEQGSVVDRIDYNVDAVQTSVSQGLQQLRQAAAAYKRGNGKLKCIVGLAGVT
LFLIILLFITKLS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaagaatctgaccgatgtctacttgcttatgagaagcaactccgcgcgcgcc
aaacgcagcctagatgagtttcaggatgacgtcggtgacacagtgtccttggtaagtgcc
tcgggtgatgccgaacgaggagaatggggcggtccaaggaatcgcgaacgtcgggtttta
caggcgccattgtggaccgacaacctcgccgaaatcaaggccgatatagcgcgaatccgt
catcatttaaccgaattaaagcgacttcatgacaagcacctaaacagaccatcgcttctc
gacgaacaagacgaagaatctaggattcgtgcagctcaagacgaaataggcagactgctt
cgagactgccagtcacacgtagcaatcatcaacaggtggtctcaagcaaaacagtccggc
tgggcggagcgccagttaacggataacgttgttcgagctgtagcaggtcaacttcgcgag
gttacggagcttttccgacaaagccaaaccgactattgcaatagaattaaacaacgtaat
aatgctggagcattcttcgatcagacgattagtctcgacgagccgccaacagacccagca
attatgcagagcgatatgatgttcgtcacgacacaagatctactaacagcagaagaagta
gcccaacgtgaggaggagatccaagcggtcgtacgttccattaacgaactaaatgtcgta
tttaaggaggttgcgcggctggtcgttgaacagggttcggttgttgatcgaattgactat
aacgtcgatgccgttcagacttcggtgagtcaaggtctccaacaacttcggcaagcagcc
gccgcctataaacgaggaaatggcaaattgaagtgcattgtcggtctcgccggtgtaact
ttgttcctaatcattcttcttttcatcacgaaacttagttga
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