Varroa jacobsoni: 111270763
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Entry
111270763 CDS
T07417
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16-like isoform X1
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111270763
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
111270763
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
Beta-prop_IFT140_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_HPS5
MED16_helical
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WDR55
Motif
Other DBs
NCBI-GeneID:
111270763
NCBI-ProteinID:
XP_022706899
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MEQVYSVFRRPSSLPNAEWRERALKCSVSSRSALAFTADSLDGPGRVLSFGVYVVDLNTP
WHPWQVLNHNEEITCLEWDSSGTRLMVGDAVGSILIFQMNNFLLNQWTLVSTTKFPGEHL
LAGVWFHSGKKVAVNIEKKDSCMYLEKYSHLKFEPSMKRMGGKRSEGCLAISASGLVCVV
LLCGDNSIVSSSQPLTYFRNRLQLVDLNYGKNGSIIAICSDGLSRSPVRCFAIVLVMDQD
KCQINIEPFSGFCPNSQNEEGYRRVTHLRCVLKEASDAVVVSVTNGQQGILELWELTEET
VSLHPLVGKCENRTSVSWRLHAVSSHASPVAALATPRLSLYELSRPQSCIVVAFKDHSVK
CFAREKLTCLSSVSTMVSPHAIKSQQHGQISYMCISHTGCVLIAIDSLSQLALFRLPPVT
EPGAPISVPFAATVLEYCLITGVDWWDVLVSLRPGLIEKVSEKLCEVFDKQPPGIQQFYE
SRFLAIKGSLYRLLNMGFIKAGDCHAQMMLSAVSCGIKALLRPRETKPDGGPADTLSALI
NDRAQVSNTMDKVLVNLDTREFFVEPAILPSVQHHVQWVSDLALHLMASLPLQICHRQRF
PGGGLIQDAKSINTIRELLVIFRMWGLLSESCLPVYTRMTENLDVLGVLFKLLTKTLINH
GSEPDATLLEECSVLPSQILIPSLDLASHSHEGVCGPALFVQPLPLALEFGMMADFVATH
HHKTAGTVEGSVRSTSHTDIVRHISLGKHVVQVRKCTRCFSLSMLRSSQNLSVMRAWEQR
WLRCCPCGGGLHITRCACDRPMRRSWPPFIVQ
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagtttactccgtgtttcgaagaccgtcctcgcttccgaatgcggaatggcga
gagagagctttaaagtgttccgtatcgtctcgaagtgcactggcattcacagccgattct
ctggatggtcctggtagagttctgtcgttcggggtgtacgttgtagatctgaatacgcct
tggcatccgtggcaagtccttaaccataacgaggagattacttgtcttgaatgggactca
agtggcacgagacttatggttggcgacgctgttggttctatcctcatctttcagatgaac
aactttctactcaaccagtggactctagtgtcaacaacaaagtttcccggggaacatctg
cttgccggcgtctggtttcatagcggcaagaaagtcgctgtgaatatagagaaaaaggat
agttgcatgtatctggagaaatactctcatctgaagttcgaaccatcaatgaagcgaatg
ggtggcaaacgatctgagggatgtctggcaattagtgcatcgggtcttgtgtgtgttgtc
ctattgtgcggtgataattcgatagtttcttcgtcacagccgttaacatactttcgcaat
cgactacagcttgtcgaccttaattacggtaaaaacgggtcgattattgctatctgcagc
gatggtctgtcacgttctccagttcgatgcttcgctattgtgctcgtcatggatcaggac
aaatgtcaaataaatattgagccgttttccggtttctgtccgaattcgcaaaatgaagaa
ggctatcgaagagtcacccaccttcgatgtgttctaaaggaagcctcggatgccgtcgtt
gtatcagttacgaacggtcagcaaggcatactagagctatgggaacttacggaggaaaca
gttagtttgcatccgcttgtcggcaaatgcgagaacagaacaagtgtcagctggaggtta
cacgctgtaagttcgcacgcttcaccggtggcggcacttgcaaccccgcggctcagcctc
tacgagctaagtcgaccacagtcgtgtatagtcgttgcatttaaggatcacagtgtcaaa
tgctttgcccgtgaaaagctaacgtgtttaagtagtgtaagcactatggttagtcctcat
gcaatcaagagtcaacagcatggacaaatatcatatatgtgtatcagtcacacaggatgt
gtacttattgctatcgacagcctatcacagctagcgctattcagattaccaccagttacc
gagccaggagcacctataagcgtgccgtttgcagcgactgttctcgaatactgtcttatt
acaggagttgactggtgggatgttcttgtaagcctacgaccaggcctcatcgagaaggtg
tctgaaaaactttgcgaggtttttgataaacaacctcctggcatacaacagttctatgaa
agtcgctttctagccatcaaaggcagcctgtatcgtcttctaaacatgggttttataaag
gcaggtgattgccatgctcagatgatgttgtcggccgtgagctgcggaattaaggcatta
cttcgacctagggagacgaaaccagatggaggtccagcagatacgctatcggcgttaatc
aatgatcgcgcgcaagtaagcaacacaatggacaaagttcttgtgaatctcgacacgagg
gaattttttgttgaaccagctattcttccttcagttcaacatcatgttcagtgggtttct
gacttagccctacatctcatggcttcactgccattacagatatgccaccgacaacgtttt
cctggtggtggtctcatccaagatgcaaagagcattaacaccatccgagaactgttggta
attttccgtatgtggggtctgttgtcagagagttgcttgccggtgtatacgcgtatgacg
gaaaatctagatgtgctcggcgttctcttcaagctactcacgaaaacgctgataaatcat
ggctcggaaccggacgcgacgttgctagaggagtgcagtgtacttccatcccaaattctt
ataccatccctagacctagccagccattcacacgaaggcgtctgtggaccagcgctgttt
gttcaaccacttccgttagcattggagtttggtatgatggcggattttgtcgccactcat
caccataaaacagctggaaccgttgaggggtccgtgcggagcacctcacatacagacatt
gttcggcacatttcactgggaaagcatgttgtccaagtgagaaagtgtacgcgttgcttc
agcttgtcgatgcttagatcgagccagaatttaagtgttatgcgagcgtgggaacagaga
tggctgcggtgctgtccctgtggaggcggtctccatatcacaaggtgcgcctgtgatcga
cccatgcggagaagctggccgccgtttattgtccaatga
DBGET
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