Varroa jacobsoni: 111270773
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Entry
111270773 CDS
T07417
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
vja
Varroa jacobsoni
Pathway
vja03013
Nucleocytoplasmic transport
vja03015
mRNA surveillance pathway
vja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111270773
09122 Translation
03013 Nucleocytoplasmic transport
111270773
03015 mRNA surveillance pathway
111270773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111270773
03041 Spliceosome [BR:
vja03041
]
111270773
03009 Ribosome biogenesis [BR:
vja03009
]
111270773
03012 Translation factors [BR:
vja03012
]
111270773
Enzymes [BR:
vja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111270773
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111270773
mRNA cycle factors
Stress granule specific factors
111270773
Spliceosome [BR:
vja03041
]
Complex C
Other components
EJC/TREX
111270773
Ribosome biogenesis [BR:
vja03009
]
Eukaryotic type
90S particles
Helicases
111270773
Translation factors [BR:
vja03012
]
Eukaryotic type
Initiation factors
eIF-4
111270773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
TniB
Motif
Other DBs
NCBI-GeneID:
111270773
NCBI-ProteinID:
XP_022706907
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MAYRGKKQSPDEAMANLEFETSDGVEVINSFDAMGLREDLLRGIYAYGFEKPSAIQQRSI
APIVSKRDVIAQSQSGTGKTATFSIGVLQSLDTQVRETQVLILSPTRELALQIQKVILAL
GDYMSVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIKRRNLRTRGIKMLVLDEA
DEMLNKGFKEQIYDVYRYLPPGTQVVLISATLPHEILEITNKFMTDPVRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLSQKMLEANFTVSSMHG
DMPQKERDAIMKEFRAGSTRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKSDDIRILRDIEQYYATQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcataccgaggcaaaaaacagagtccagatgaagctatggccaacctcgagtttgaa
actagcgacggtgttgaggtgattaattctttcgacgcaatggggcttcgtgaggacctc
ttgcgtggcatttatgcctatggatttgagaaaccttcagctattcaacaacgttcaatt
gcaccaatcgtaagtaaacgcgatgtcattgctcagtcacaatccggaaccggaaaaact
gccacattctcgatcggtgttcttcagtcacttgatacgcaagttcgtgagacacaggtt
ttgatactttcaccgacacgtgaattggcccttcaaatccagaaggtcatattagcgtta
ggtgattacatgtctgtacaatgccatgcgtgtattggaggaacgaatcttggcgaggac
atccgcaaattagattatggccagcatgttgttagtggaacgcctggcagagtttatgat
atgattaagagacgtaatctgcgcaccagagggattaaaatgctggtattagacgaagcc
gatgaaatgctcaacaagggtttcaaagaacaaatctacgacgtctaccgttatctaccc
cccggcacacaagtagttcttatctctgctacgcttcctcatgaaattctcgagattacc
aacaaatttatgactgatcccgtgcgcattctcgtgaaacgtgatgaattgacactcgaa
ggcatcaaacagttcttcgtagcggtagaacgtgaggagtggaaatttgatacactttgc
gacctttatgatacattaacgattacacaagccgttattttctgtaatacgaaacgcaaa
gtagattggctctctcagaagatgctagaggcaaactttacagtgagctcgatgcatggt
gacatgccgcaaaaggaacgtgacgctatcatgaaagagtttcgcgcaggaagcactcga
gtcctcatcacgacggacatttgggccagaggaatcgacgtacaacaggtctcccttgtc
attaattatgatctaccgaacaatcgagaactgtatattcaccgcattggacgttcaggc
cgttttggccgtaaaggtgtagctattaatttcgttaaaagtgacgatattcgaatctta
cgtgacatcgagcagtattatgctacgcagattgacgaaatgcccatgaacgtcgccgac
ctcatctaa
DBGET
integrated database retrieval system
