Varroa jacobsoni: 111270958 Help Entry 111270958         CDS       T07417                                  Name (RefSeq) protein SCAF8-like isoform X1   KO K13191   RNA-binding protein 16 Organism vja  Varroa jacobsoni Brite KEGG Orthology (KO) [BR:vja00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vja03021]     111270958    03041 Spliceosome [BR:vja03041]     111270958 Transcription machinery [BR:vja03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      111270958 Spliceosome [BR:vja03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    RNA binding proteins (RBPs)     111270958 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CID RRM_1 Motif Other DBs NCBI-GeneID:  111270958 NCBI-ProteinID:  XP_022707186 LinkDB All DBs Position Unknown AA seq 1130 aa AA seqDB search MSTLPWTHLNVGALLDEAISFRYAHKDLVCVVLSVKRLVLVCNAAHTALYYLVNCIDLTV LWSLVVCASSIKDSVWWLTMASEAAMEEVKAFNAELQSLYETRPPVSKAKMTDITKRAMK TVKLYKHVVHSVEKFIHKCKPEYKVPGLYVIDSIVRQSRHQFKAEKDVFAPRFQKNIKNT FQALVKCPEDERPKIVRVLNLWQKNGVFPIEVTQMLHEVVAAAPSIKPPESRNGSREEAI KATVEDPSLATKISTMASQLKEQSKENKPAFDRKLLDFDYGEEEDDKQAPPPPPPVTIPH PAETKIEDVHKIANSVLNPSMLESIQKALAAQGVGQIIKSDPAAPPEMMNLAMVPPPSTV MHPNPFAIPVMVANPFAAPPPPPATSADTDIRQQIVTSGGGGKDEDLRQRDDSRRRRSRS PGGRRRSRSRSGNRSSRRRDRSRDRRRDRSSSVDREKERERLSKGLPPMKKGCVTLCSNT LWLGHVSKTTTESDLEASFGEYGKILSIDIIPPRGCAYICMDRRQDAYRTLLNKRNIRMK GSSSRIKIAWAPHKGTKNHKELKDFWDVDQGCFYIPDDRMPAVTDLSQLEDGGMIDIDSM SDDLRQRYDMVKSGGKTTLPMGVPPVVPAGIPLPFGVPPVSAAFPIPAIPTPTGTPLPMI GMPSMPPMPQMPSMMSMLPAGMMRPAVPPAPPTAPQLPSASPVSTSSNGSVVPPPPPPPL TGVSPVPAPSSSSVLSPSSSDNQPLSRPPQTMSSAGSFGPQGVRGPVPTSRGPMGQMGAG PMGSPMGGPMGGPMGGPRGTMGPMGNMGMGGPRGPMGMPMGGPMGPMGPMGGPMGHRMPV GPRGPGMRNGPEGHMDTPMDMPPRFGGPGGFMGARGPPGQWNGPPGGPPAWRHGPPGMRP DFRPPPLHMQHQQGMFNGPPPPGGPFGPGGPMGGPMGGPGGMGGPGGPGNLASLVRQPLQ LQGPPGVIPTTSSITSVSSPTKRPAEVTATSSTGERTERKRERKSRWSDAPDDAPAPPPP TLAALPPVEQFPAGAVSASTGGAPSAKEEEDIRTVSPEALKAEETGEGTPVADEAVSPRQ IQGNLQPAELVPVNVGPSRDHEAEETKGRKRDGNIDMFGESPTSNVTAKT NT seq 3393 nt NT seq  +upstreamnt  +downstreamnt atgagcactcttccttggactcatttaaatgttggcgctcttcttgatgaagcgatatca ttccgctacgcgcacaaagatcttgtttgcgtcgtactgtcagtaaaacggcttgtgctt gtttgcaatgcggctcacacggcgctgtattatcttgtgaattgtattgatttaactgta ttgtggagtctggtcgtttgtgcgagttcgatcaaagactcggtgtggtggttgacgatg gctagtgaggcagccatggaggaagtgaaggcttttaatgccgagctccagtcgttatac gaaaccaggccgccagtttcgaaagcgaagatgacagatattacgaagagggcgatgaag accgtgaaactctacaagcatgtcgtccactccgtggaaaaattcatccacaagtgtaaa cccgaatataaggtccctggattgtatgttatcgattctatcgtccgacaaagccggcat caatttaaggctgagaaagacgtgtttgctccacgatttcagaaaaacatcaaaaacaca tttcaggctctagtaaaatgtccagaagatgagcgacctaaaatagtgcgagttctaaat ctttggcaaaagaatggtgtatttcctattgaagttacacagatgcttcatgaagttgtt gcagctgcaccttcaatcaagccacctgagtctcgcaatggttctcgagaagaagcgatt aaagcaacagtggaagatccgtccttggcgacaaagatttcgacaatggcatctcaactc aaagagcaaagtaaagaaaacaagccagcttttgatcgaaaattactagactttgattat ggagaagaggaagatgataaacaggctccaccgcccccgccaccggtcacaatccctcac ccagcggaaacgaaaattgaagatgtgcacaagattgccaatagtgtcctcaatccttca atgctcgaatctatccaaaaagcgttggcagcacaaggagtaggacaaataataaaatct gatccagcagctcctcctgaaatgatgaatttagctatggtgccacctcccagcaccgtt atgcaccctaacccatttgctattcctgttatggtagcaaacccatttgcagcaccacca ccaccacctgcaacctcggctgacaccgacattcgtcagcaaattgtaactagtggagga ggtggcaaggatgaagaccttcgacaacgagacgattctagaagaagacgtagtcgcagt cctggtggccgacggcggtcgagatcaaggtcaggcaaccgatcttcgagaagacgcgac cgttcaagggatcgacggcgagaccgaagtagctcagttgaccgagaaaaggagagagag cgcttatcgaaaggacttcctcctatgaagaagggctgcgttaccttgtgctctaatacg ttgtggcttggccatgtgtctaaaactactaccgaatcggacctcgaagcaagtttcgga gagtacggaaaaattctcagcattgatattattcccccgcgaggttgtgcatacatttgt atggaccgacgacaggacgcgtaccgtactctgcttaacaaacgcaacatccgcatgaag ggatcaagttcacgtattaaaattgcttgggctccacacaaaggaaccaagaaccacaag gagctcaaagatttttgggatgtagatcagggatgcttctacattccagatgatcgaatg ccagctgtcacagatctgtcacaactggaggatggcggcatgatcgatatcgactccatg tcagatgaccttcgtcaacgctatgatatggtgaaatcgggtggtaaaacgactttacca atgggggtaccacctgtagttccagccgggattccgctgccgtttggagttcccccagtg agtgcagcattcccgatacccgccattccgactccgactggcactccccttccaatgatc ggtatgccatcgatgccgcccatgcctcaaatgccttcgatgatgtcaatgcttcccgca ggaatgatgcgtcctgccgtaccccctgcaccacctactgcaccacaattaccttcagcg tcgcctgtttcaacaagctcaaacggcagtgtcgttcctccaccgccacctccacctttg actggtgtatctccagtacctgcgccatcatcatcatctgttctttcaccatctagcagt gataaccagcctctttcacggccacctcagacgatgagttcagcaggtagttttggccct cagggagttcgtggtccggtacctacttcccggggcccgatgggtcagatgggtgccgga ccgatgggaagcccaatgggtgggcctatgggaggtcccatgggtgggcctcggggaaca atgggccctatgggaaatatgggaatgggcggtcctcgaggtcccatgggcatgcccatg ggtggtccgatgggacccatggggcctatgggtgggccaatgggtcatcggatgccagtg ggaccgagaggtcctggaatgcgaaacggacctgaagggcatatggacactccaatggat atgccccccaggttcggtggacctggaggttttatgggtgcacgaggtcctcccggacag tggaacgggcctccagggggacccccggcgtggcgacatggcccacccggaatgcgacct gactttagacctccaccgctgcatatgcagcatcaacagggcatgttcaacggtcctcca ccaccaggaggtccgtttggaccgggtggacctatgggcggccctatgggtggaccgggg ggtatgggtggtcctggaggaccaggcaaccttgccagtttggtcagacagccgttacag ttacagggaccgccaggagtaatacctacaacgtctagcatcacttccgtttctagtcca acaaaacgacccgcggaagttactgcaacctcttccaccggtgaacgtaccgagcgaaaa cgagaacgaaaatcgcggtggtctgacgcgccagacgatgctcctgctccaccgccacca acgttagctgcattgccgcctgtggaacagtttcccgcaggggcagtgtctgcctccacg ggcggtgcgccttctgcgaaagaagaggaagacataaggacagtctccccagaagctctc aaagctgaagaaactggcgaaggcactcctgtcgctgatgaggctgtttcaccgaggcag attcaaggcaatttacaacctgccgaactggttcctgtaaatgtaggaccaagtcgagat catgaggccgaggagacgaagggacgaaaaagagacggtaatattgatatgtttggtgaa tcaccgacttccaatgtgaccgctaagacgtaa

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