Varroa jacobsoni: 111270979
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Entry
111270979 CDS
T07417
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111270979
03041 Spliceosome [BR:
vja03041
]
111270979
03036 Chromosome and associated proteins [BR:
vja03036
]
111270979
Enzymes [BR:
vja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111270979
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111270979
mRNA cycle factors
Common to processing body (P body) and stress granule
111270979
Spliceosome [BR:
vja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111270979
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111270979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
111270979
NCBI-ProteinID:
XP_022707212
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MTFESAQNGKGLVQQVAALDLKGDSGQGSQSQGNSAKPAKYVPPALRGGGGGGNPPPADF
GPGPDRRGGDKGGPRGYGGGFGARDGGRRDGLPRDNYGRSGGFGGRDGGGRYDNGRRDFG
GSSWRSGGDDYRDNNRGSDFGRGGGGGYGGRGSGGGYGGRDGGRGGSRWNDHCDDWTKAL
ERDEALEHKLFGAPHAGRTSSGINFEKYEDIPVDVSGNDPPPPIDTFNDCGTICELLRGN
IELANYTVPTPVQKYAIPIVMAHRDLMACAQTGSGKTAAFLIPSINKLLVDGPPERIPPP
QKFTTRQKQYPLALILSPTRELAQQIYDEACKFSYRSRVRACVVYGGAEPVQQMKDLDKG
CQLLVATPGRLLDMIERGKVALDLVRFLVLDEADRMLDMGFEPQIKKIVYDTQMPETGDR
QTLMFSATFPKKVQELATSFLHDYIFLAVGRVGSTSENITQKIVWVDEHDKREFLLDLLE
AAGLRCGPDGLAPEAAETLTLVFVETKKGADSLENFLLKEGYPVTSIHGDRSQGEREDAL
RSFRKGHTPIIVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRIGRTGRVGNLGLATSF
FNDKNRNLASDLAELLQEAKQERPDWLLGLAKEESRGFGRSGRSGGGSSNRRFTSGGFAS
RDYRQGNFVSRNTNSSGGGGGPTGGRGSSSSSGSHRNGFGSFGYGGSGYGGGGFGGGSAS
SEWWD
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgagtcagcccaaaatggaaaaggtctagtgcagcaagtggctgctctagac
ttgaaaggcgattcaggccagggttcccagtcacaaggaaactcggctaagcctgccaag
tacgtcccccctgcactacgtggagggggcggaggtggtaatcctccgccagctgatttc
ggaccaggacctgaccgtcgaggcggcgataagggaggcccccgaggctacggtggagga
tttggggctcgcgacggaggcaggagagacgggctgcccagagacaactacggccgcagc
ggaggtttcggtggacgggacggcggtggccgttacgacaacggtcgccgagacttcggt
ggttcgagttggcgtagcggtggagacgactatcgcgacaataatcgaggcagcgatttt
ggccgaggcgggggcggcggctatggaggccgaggttcgggaggcggttatggcggccgt
gacggtggtcgaggaggaagccgctggaatgatcactgtgatgattggacaaaggctttg
gagcgtgacgaagccttggaacacaagttgtttggggcacctcacgccggtcggacgagc
tctgggataaactttgaaaagtacgaggacattcccgtcgacgtctctggcaatgatcct
ccgccgccaattgacaccttcaatgactgcggcacgatctgcgagttgcttcgaggcaac
atcgaattagctaattacacggtaccgacgcccgtgcagaagtatgccatccccattgtc
atggctcaccgtgaccttatggcctgtgcgcagacaggctcgggcaagactgcagctttc
ctcataccatctattaacaagctgctggtcgacggcccccctgaacgtatcccaccaccg
cagaagttcactacgcgccagaagcagtatcctcttgcgctgattctctcgccgacacgt
gagctggcccagcaaatttacgacgaagcgtgcaagttctcgtaccgcagccgtgtgcga
gcttgcgtcgtatacggtggcgctgagccggtgcaacagatgaaagatctagataaaggt
tgccaattactagtggccactcctggccgtctgctcgatatgattgagcgaggtaaggtg
gcgcttgaccttgtacggttcctcgtgctcgacgaggctgatcgtatgctcgacatgggt
tttgaaccgcaaattaagaagatcgtttacgacactcagatgccggagacaggtgaccgt
caaacactgatgttctcggccactttccccaagaaagttcaggagctggccactagcttc
ctacacgactacattttccttgccgttggaagagtgggctccacttcggagaacatcact
caaaagattgtgtgggttgatgagcacgacaagagggagttcctgctggaccttttggag
gccgcgggactgcgctgtggtcccgacggtttggcgcccgaagcggcggagaccctgaca
ctggtcttcgtagaaacgaagaagggcgccgacagcctggagaacttcctcctgaaagaa
ggctaccccgtcacgtcaattcacggcgacaggagtcagggagagcgcgaagatgccctg
cgaagcttccgcaagggccatacgcctatcattgtagcaacagctgtggccgcccgaggc
ttggatatccccaacgttaaacacgtcatcaatttcgatctcccgaccgacatcgaggaa
tacgtgcaccgcattggtcgtactggccgtgtgggtaacctcggactggcgacatcgttc
tttaacgacaagaaccgcaatctggcttcggatctagctgagcttcttcaagaagcaaag
caggaacgcccggactggcttctaggtctcgcgaaggaggagagccgcggcttcggtcgc
agtggtcgcagtggcggcggcagcagcaatcgccgtttcaccagcggaggatttgcttcc
cgagattatcgtcagggcaactttgtaagtcgcaataccaacagcagcggcggcggtggg
ggtccaaccggtggacgtggaagtagctcgtcgtctgggagccatcgtaatggtttcgga
agttttggctacggcggaagtggctatggtggcggtggctttggtggaggctctgcctca
agcgagtggtgggattaa
DBGET
integrated database retrieval system
