Varroa jacobsoni: 111271420
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Entry
111271420 CDS
T07417
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
vja
Varroa jacobsoni
Pathway
vja03013
Nucleocytoplasmic transport
vja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111271420
03015 mRNA surveillance pathway
111271420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111271420
03041 Spliceosome [BR:
vja03041
]
111271420
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111271420
Spliceosome [BR:
vja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
111271420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
111271420
NCBI-ProteinID:
XP_022707922
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MTDAGFFRGTSAEQDNRFADKQKKLLKSLKFHEALATKVDMNRVQLDSLKPWISEKITQL
LGIEDEVVIEFVFNQLEANRYPDPKIMQINMTGFLHGKNAREFMGELWSRLAAAQASKGG
VHPDLLDKKKEEIRIKLAAEERERERGLAEGKLSNQALAKSSTGASAGKRSRSRSRSRSR
SWARTHSRSPPRNNSATNRDTSSPSRDRSRDRDRERHHRHHSPQQQQAGDSNRDPQSKDS
RRRSRSDSPGSGGKSERVSPHQRPADSVQNKRSYRGQRDDSSSPRRTSDKQQDSRRSPKR
RERDRDRERDRDHHGTRGNSPRQRDNNNGHQRHQRRRDDRRSRSRSRDRRDRDRRSPVKR
RSPSSPPPRRRSPLRRESPRRRLSGTGSPKRRSPDGRRMSPIRRRSPDGRNRGTIGTAPS
RRRGRSPRDDMSPDMRRRSPDARIASPDSRRRLSADRRRMSPDGRRRSPEVRRSPELKRR
SPNLRRMSPDDRRISPNIRRRSPEPRRNLSPEGRRMAIENRRMSPDTRRHVSNDGKRSRS
PRRLAHSPRRNFVASPQRRSGSSPRHYGTGGPDPKRRKGSHTPDDELYERVPVVQRERRE
FSREQIQRLERHRSADHRERDSSPLAPPGVSPTRTPSPTIPRDVRGPVRERGSVSSSPVV
KRQSVAKSSSSESEESPEEERRREKKAKKKSKKHKHKKDKKKKSSKKAKKAKKQSESDEE
NSESDSEGDDFEEKERLLRERALQSMKNREKALANPRTEKIDSRQMAARADSDESD
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgccggttttttcaggggaacgagcgctgagcaggataatcgcttcgctgat
aagcagaagaagctgttgaagtctctgaagttccatgaagcgttggcgacgaaggtcgac
atgaaccgggtacaacttgattctttaaaaccttggatctccgaaaagatcacccagctt
cttggcatcgaggacgaggtcgtaatcgagttcgtcttcaatcagcttgaggcaaacaga
tacccagacccgaaaatcatgcagatcaacatgacgggcttcctgcacggcaagaacgca
cgagaattcatgggcgaactttggagtaggctcgcggccgcgcaagccagtaagggcggg
gttcacccggacttgttggataagaagaaagaggagattcgcatcaaacttgcggccgag
gaacgcgaaagagagagagggctcgccgaagggaaactgtccaaccaagcgttggcgaag
tcttcgacgggtgccagcgccggcaagcgaagccggagtcgcagccggagccgcagccgc
tcgtgggctcgtacccattcgcgttcgcccccgcgtaacaattccgcgacgaaccgcgac
acgtcaagtccaagtcgcgaccgaagtcgtgaccgcgaccgtgagcgccaccatcggcat
cacagtccgcagcaacagcaggcgggggactcgaatcgagacccccagagcaaagattca
cgcagaaggtctcggtcggattcaccgggtagcggtgggaaaagcgaacgggtaagccct
catcagcggccagcggattcggtgcagaacaaacggagctatcgcggacagcgtgacgac
tcgagctcacccaggaggacgtccgacaaacagcaggatagtcggaggagcccgaaaagg
agggaacgcgatcgagatcgcgaacgtgaccgggatcaccatgggacacgaggcaacagt
ccgagacagcgcgacaataacaacggtcaccaacgccatcaacgacgacgggacgataga
cgcagccggtctcgatcaagggatagacgagatcgtgatcgccgaagtcctgtaaaacgg
cgatcgcccagttcgcctccaccaaggcggaggtcaccactaaggagggagtcgccccga
agaaggttatccggcactggcagtcctaaaaggagatctccagatggacgcagaatgtcg
cccatacgtcgtcgctcgcctgacggtaggaacagaggaacaatagggacagcaccatct
cgcaggcgcggccgatcgcccagagatgacatgtcccccgatatgcgcaggaggtcgccc
gatgcgagaatcgcgtcaccggattcaagaaggcgcctttccgctgataggcgtcgaatg
tcaccagacggcaggaggcgatctcctgaagttaggagatcacccgaactcaaacgaagg
tctccgaatctgagacgaatgtctccggatgacagaaggatatcgcctaatattcggagg
agatcccccgaaccgagacgaaatctatctccagaaggtcgaagaatggccattgagaac
agaaggatgtccccagatacaaggaggcatgtgtcaaatgacggaaaaaggagtcgttca
ccacgtcgcctcgctcattctcccagacggaattttgtagcctcgccacagcgacgaagc
ggcagttcgccaaggcattacggaactggtgggcctgatccaaaaaggcgaaaaggttcc
cacacacccgacgatgaactatacgaaagagttcccgtagtacaaagagagcgacgggaa
ttcagcagggagcaaatccagagactggaaagacaccgcagtgctgaccaccgagagaga
gattcgagtcccctagcccctccaggagtaagccctacccgtacacccagccctacaata
cctagggatgtgagaggcccggttcgtgaaaggggttcagtgagttcgtctccggtggtc
aagaggcaatcggttgctaagagtagctcatcagaatccgaagaatctcccgaggaggag
agacgtagagagaaaaaagccaaaaagaagagcaaaaaacacaagcataagaaggacaag
aaaaagaagagtagcaaaaaggcgaaaaaggccaagaaacagagcgaatccgacgaagaa
aattcggagtccgactctgaaggagatgattttgaagagaaagaacgtttgttacgggaa
agggcgctgcagtcgatgaagaatcgtgagaaagcgttggctaatcctcggacagaaaaa
atcgatagcagacaaatggcggcacgggccgattccgatgagagtgactga
DBGET
integrated database retrieval system
