Varroa jacobsoni: 111271503
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Entry
111271503 CDS
T07417
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vja03400
]
111271503
Enzymes [BR:
vja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111271503
DNA repair and recombination proteins [BR:
vja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
111271503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Helicase_PWI
Cas3-like_C_2
T2SSE
YicC-like_N
Motif
Other DBs
NCBI-GeneID:
111271503
NCBI-ProteinID:
XP_022708080
LinkDB
All DBs
Position
Unknown
AA seq
2178 aa
AA seq
DB search
MAERRISLLRPMPMEQLRFSGLWRGEAFYKTGLVNPPDFCQTKQQIILEESGHSVKANWQ
KLKDELSEQVRALPQSEITKSLRELQVLCQEALGDVDEATCQAAAIQLLTIFAENQGVLR
NEDLIAVTCSVAPISRNILERIFEHVMLMRDAFGEVLGSVVQSVSKEEKGNAFLKEVKDL
KFFRMQCSPSWLRKDFAFVFRKPVQDVERKLHFNDIVQKTNEQSGRLARRTTDYIDAGWL
EDKVRSYMKTRVRASDMSPEEIVEIIMVRLESNNQDDVVSADLFEMLGIGYFDLISEVIK
ERISIVKAATKNAVLGVAVARNDKSVGLARQYNNPLGETVSVDLVSNIKIKKMMAKEEKK
LQKVVANGDSDDLTINELRKLKQMELTERYGARSGRSSSNGVYIGQNTTMEETMPNVYDC
MRYLRSTKVFVGGLNLVLPEGCQQIVKPYYDEIHIPVKNHSPPKVCPLISICSLDEILQM
AFPNTEHLNLIQSAVYPVAYKLNDNMLICAPTGAGKTNVAMLTIMRLVRMYIDETINRVS
NDFKIVYIAPMKALAGEMVSNFARRLSPFGVIVRELTGDMQLTKMEMTKTHMLITTPEKW
DVVTRKGSGDAQVLQMVRLLILDEVHLLHSDRGPVLEALVARTLRQVESMQSMIRIIGLS
ATLPNYVDVANFLRVNTARGLFYFDHRFRPVPLSQTFIGIKGRKKTEQVQRMDEVAFEKA
FEIVKNGNQVMVFVHSRNNTLRSAEVMMQIATEHGKLEYFLRSKHPQYKIFEKQLQSSRN
MKLQQIFASGMGMHHAGMVRQDRNFVEKAFSAGVISVLFCTSTLAWGVNLPANCVIIKGT
DIYDSQKGSFVDLNILDVQQIFGRAGRPQFQQNGEAVIITHHAKMSNYISLMTNQTTIES
KFHENLVDNLIAEIVLGTVTTVDEAVDWLSYTYLMVRMKKNPLVYGITLKVVSKDPNLIN
YRRELIIAAAKKLDLAKMIRYHEKSGSFDATDLGRTASCFYIKYETVLRINEWFERRISP
MQDGDVLEIISYAQEFDQLQLREDECHELQIMERNCKLPLRQGVHGTKVNTLIQNYISRG
NVETFSLVSDSNYIAQNATRIARGLFEMALRKGNSLAAWRFLMNAKMLERQIWHFDSPLR
QFPGVTEKTLQMLKEKHATISHLRNMTSDEVGQLVYNKSQGRLIHQFAQNVPFIEVECSV
QPITRTVLRVSLNIMPAFVWDDHFHHNAEAFWIWVEDPESENITHSEYLVLKKKQIVNAE
PQNLVFPIPVSDPLPSQYLIHVDSDRWLGSDDEIPMPFEHLILPSVYMPHTELLDLQPLP
KTALKNELFESLYHFTHFNPIQTQLFHTLYHTDHNVLLGAPTGSGKTITAEIAMFRVFNM
EKHRKVVYIAPLKSLIKERVNDWNKRLVGQLGLNMAELTGDVTPDFRTIANADIIVTTPE
KWDGVSRSWQTRRYVQNVALIVIDEIHLLGEDRGPVLEVIVSRTNFINAFTGNKVRIIGL
STALANARDLGDWLQISEEGLFNFKPSVRPVQLEVHVSGHPGKHYCPRMAIMNQPAYKAI
LQHSPNQPVLIFVSSRRQTRLTAQALRTSVVNSENPQKWLRMTVTDMQHIQNQIRDKDLR
DLLGFGIGMHHAGLQEEDRRLVEELFLNNKIQVLIATATLAWGVNLPAHLVIVKGTEYFD
AKTNTYVDYPITDVLQMIGRAGRPQFDTSGVAVVLVHDQKKNFYQKFLYEPFPVESSLLK
VLPDHLNAEIVAGTLSTTQDCIEYMTWTFFFRRLLLNPSYYGLEDTTNESVNKFLSNLIT
DALIKLVLSHCIEIEEDERTLVPTPLAKIASYYYLSHETAKFLHETLKRNCTYLQLLEIL
CDCKEFAELPVRHNEDKENAELARDCRWGHYRKSYGSPHTKAFLLLQAHMEHCRLPCSDY
GLDLKSVLDQVPRVIQAQIDILTARGYLSSVLNCITLIQTITQARFHDLDDPLQTLPEIR
REHLYMFHKADVSTLAEAIHKVRTREGFVNLQKSLQSEFDPEYVKTVLAICKELPSIVLR
IFLDGPGCQSLQIKNRPLQGPVPEDYYIKVKPGEEYLVSVELTRLNSKPGQRGVPKAAMQ
SRTLKWKNENWFIILGHKDSGELYSLKRLSGFYHTMTHQLIFRVPESINQRIILTVFVAS
DTYLGLDQEYNLYLEPER
NT seq
6537 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgtcgaataagcctgttaaggccgatgcctatggagcaattgcgcttctcc
gggctatggcgcggagaagcgttctacaaaacgggcttagttaatccgccagatttctgc
cagaccaagcaacaaattatacttgaggagtcaggccattctgtgaaggcaaactggcaa
aaactgaaagacgaattaagtgaacaagttcgggcacttccacaatcagagatcacaaaa
tcccttcgagaattgcaggttctctgtcaggaagcattgggtgacgtcgacgaagccacg
tgccaggccgccgcaattcaactgctgactatatttgcggaaaatcaaggagttcttcgt
aatgaggacttaatcgcggtcacatgctcagtggcacccatttcgagaaacattcttgag
cgtatctttgaacatgttatgttaatgcgcgatgcctttggcgaggtactgggttctgtt
gtgcaaagcgtgtcaaaagaagaaaaagggaacgcgttcttaaaggaagtaaaggattta
aagtttttccgaatgcaatgttctcccagttggcttcggaaagatttcgcttttgtgttc
agaaagccggtccaggatgtcgaaagaaaattgcactttaacgatattgttcagaaaact
aacgaacaatccggtaggttagcgcgcagaaccactgactatattgatgcgggttggctt
gaagacaaggttcgcagttacatgaaaactcgcgtacgtgctagcgatatgtcacctgaa
gagattgttgaaattataatggttcgactcgaatccaacaaccaagatgatgtggtatca
gctgatctattcgaaatgctcggaattggttactttgacttgatctcggaggtgattaag
gagcgcatttcgattgtgaaggctgcgacgaagaacgcggtccttggggttgctgttgcg
cgaaacgacaaatcagtaggattagcccgacagtacaataaccctcttggagagactgtg
tctgtcgacctcgtaagtaatattaagataaagaagatgatggcaaaagaagagaaaaag
cttcaaaaggtggtagctaacggtgatagtgatgatctaacgataaatgaactacgaaaa
cttaaacaaatggaattaactgaacgttacggtgcgagatcaggacgatcctcttcaaat
ggggtgtacattggccaaaacacgacgatggaggaaacgatgcctaacgtttatgattgc
atgcgttacttacgaagcacaaaagtgttcgtaggcggtttgaatcttgttctcccagaa
ggttgccagcagatcgtcaaaccctactacgatgagatacatatacctgttaaaaatcac
agtccaccgaaggtgtgccccctaatatccatatgttctttggacgaaatcttacagatg
gcctttccaaatacagaacacctaaatcttatacaaagtgcagtttatccagttgcctat
aaactgaacgataatatgttgatctgtgcacccaccggagccggtaaaacgaatgtagcc
atgctgacgattatgcgcctagtacgaatgtacattgatgaaacgatcaatcgtgtgtcg
aacgacttcaaaatagtttatattgcccccatgaaggcattagctggcgaaatggtgtca
aattttgctcgaaggctctctccattcggagttattgttagggagctaactggagacatg
caactgactaaaatggaaatgacgaaaactcacatgctgattacgactccagagaagtgg
gatgtggtcacaaggaaaggttctggagacgcgcaggtcttacagatggttaggttgctg
attctcgatgaggttcacttactgcatagtgatcgcggtccggtacttgaagctctcgta
gcccgcacccttcgccaggtggaaagtatgcagtccatgattcgtattattggtttgtcc
gctacattaccgaactatgtggacgtagcgaattttcttcgagtaaacacagcaagagga
ctgttctatttcgaccatcgttttagacctgtacccttatcgcaaaccttcattggtatc
aaaggccgcaaaaaaacggagcaagtccagcgtatggatgaggttgcttttgaaaaggct
ttcgaaatagtcaagaacggcaatcaagttatggtcttcgtccattcgcggaacaatact
cttcgatcagccgaagtgatgatgcaaattgccaccgagcatggtaaacttgagtacttt
ttgcggagtaaacatccacagtataaaatttttgagaaacagctacaaagttcgcgaaat
atgaagctacaacagatatttgcgtccgggatgggcatgcaccacgcagggatggttcga
caggatcgaaacttcgttgaaaaagctttctcggcaggcgttatttcagtactattctgt
acgtctactcttgcctggggcgtgaacttgcccgccaactgtgtcatcattaaaggtacc
gacatctatgattcacaaaaaggctcctttgtagacctcaacattctagatgtgcagcag
atttttggccgagctggtcgtcctcaatttcagcaaaatggcgaggctgtgatcattacg
catcatgctaaaatgagcaattacatctcgctgatgactaatcaaactacaattgaaagt
aaatttcacgaaaatttagttgacaatttgattgccgaaattgttcttggcacagttact
acagtggatgaagccgtggattggctaagctatacgtatcttatggtacgtatgaagaag
aatccgctcgtctatggaatcacgcttaaggttgtgtctaaagatccaaacttgatcaat
taccgtcgggagctcattattgccgccgccaagaaattagacttagctaaaatgatacga
taccatgaaaaatcgggaagtttcgatgcgacagacctgggccgcactgcgtcctgtttc
tacattaaatatgagacagtacttagaatcaacgaatggtttgagcgtcgtatatcgcca
atgcaggatggtgacgtcctagagataatcagctacgcgcaggaatttgaccaattacaa
ctgcgggaagacgaatgccacgagcttcaaataatggaaagaaactgcaaactgcctcta
agacagggtgtacacggtacgaaagtaaataccctgattcaaaattatatatcgaggggc
aatgtggagacgttctcgttggtgtcggactcaaattacattgctcagaacgccaccaga
attgcccgtggtttgttcgagatggcgcttcgaaagggaaactcacttgctgcgtggcgt
tttttgatgaatgcaaaaatgcttgagcgtcaaatctggcactttgatagcccactccgt
cagttccccggtgtaacagagaaaacacttcaaatgttaaaggaaaagcatgcaaccatc
tcgcaccttagaaatatgacttcggacgaagttggacagcttgtttataataagtcacaa
ggacgccttatccatcaatttgcacaaaatgtgccgtttatagaagttgagtgttcagta
caaccaataactcgtacggtgctgagagtttcgctcaatattatgccggcatttgtttgg
gatgaccatttccaccacaacgctgaagcgttttggatctgggtggaagacccagagagt
gagaacatcacacactcggaatatttggtcctcaaaaagaagcagattgtgaatgcagaa
ccacagaaccttgtctttccgattcctgtgagtgatcctttaccttcacagtatctgatc
cacgtcgattctgataggtggctgggctccgatgacgagatccctatgccgtttgagcat
ttgattctgccaagcgtctacatgccgcatacggaactgctcgaccttcagccgttgcca
aagacggctttgaaaaatgagctctttgagtcactctaccatttcacgcatttcaacccg
attcaaacgcagctgtttcatacgctataccatactgaccataacgtgcttctgggtgcg
cctacaggatcaggtaagactatcactgcggaaatagcaatgttccgcgttttcaacatg
gaaaaacaccgcaaagttgtatatatagctcctctcaaaagtttgataaaagaacgcgtc
aacgattggaataaacggttagtgggccaacttggcttaaacatggccgagttgaccgga
gacgtcaccccggatttccggacgattgcaaatgctgatattattgtcaccacgccagaa
aagtgggacggagtatcccgttcgtggcaaacgcgacgctacgtacaaaatgtggctctc
attgtgattgacgagattcatcttctcggcgaagaccgaggcccggtccttgaagtgatc
gtatcgcgaacgaacttcattaacgctttcactgggaataaagtgcgtattataggcctg
tccactgcgctggcaaacgcgcgtgatctgggcgactggttgcagattagtgaggaaggt
cttttcaacttcaagccatcagtgagaccagtgcagctcgaagtgcatgtgtcaggtcat
ccgggcaaacactattgcccacgtatggcgattatgaatcagcccgcatacaaggcaatc
ctacagcattcgcctaatcagccagtgctgatcttcgtgtcatcccgtaggcagactcga
ttaacagcgcaggctctccgaacatctgtcgtcaatagcgagaacccacaaaagtggttg
cgaatgactgtcactgatatgcagcatattcagaatcagattcgagataaagacctacgc
gatttgcttggctttggtataggaatgcatcacgccgggctgcaggaggaggatcgtcgg
ctcgtcgaagaactttttctcaacaacaagattcaagtgctgatagcgacggccacgtta
gcgtggggtgtcaacctacccgctcatcttgtcattgtgaaaggcacggaatatttcgac
gccaaaaccaatacttatgtcgattacccgattacagacgttttgcaaatgatcggtaga
gcagggcggccacagttcgataccagtggagttgccgttgtactggtacatgaccaaaaa
aagaacttctaccagaagtttctctacgaaccgttcccagtagagagttctcttctaaaa
gttcttccagatcatttaaacgctgaaattgtggcaggaactctgtccactactcaagac
tgcattgaatatatgacttggacatttttcttcaggcgtttgttgcttaatcccagttac
tatggtttggaggatactacaaatgaaagcgttaacaagtttctatcgaatctcattacc
gatgcactaatcaaactggttctttcgcattgcattgagatcgaagaagacgagcgcaca
ttggtgcctacgccccttgcaaagatcgcgtcctactattatctttcacatgaaactgcg
aaattccttcatgaaacgctgaaacgcaactgcacgtacctgcaactgctcgaaatacta
tgtgattgcaaggagtttgcggagttacctgttcgacacaacgaagataaggaaaatgca
gaattggctagagactgtcgctggggtcactatcgtaaaagctacggaagtccacataca
aaagcgttcctgttattacaggcgcacatggagcactgccgattgccgtgttcagactac
gggcttgatctcaaatccgttcttgatcaggttccaagggttatccaagctcagatagat
attcttacagcccgaggttatttgtcatctgtgttgaactgtataacgctgattcagact
ataacgcaagcgcgattccatgatcttgacgatcctcttcaaacgttaccggaaattagg
cgcgaacacctgtacatgttccataaagccgatgtgtctaccctggccgaagccatccac
aaggtgcgcacgagggaaggttttgtaaatcttcaaaagtctctacaatcggagtttgat
cctgagtacgttaagacagttttagcaatctgcaaagagcttccatcaatagtattaaga
atcttcctcgatggcccaggttgtcagtctctgcaaataaaaaatagacctttacaaggc
cctgtgccagaagattactatattaaggtcaagccaggtgaggagtacttagtgagcgtt
gagctgactcgactcaactctaaaccgggccagcgtggcgtcccgaaagcagcaatgcag
tcacggacgctaaagtggaaaaatgaaaactggtttatcatcttaggacataaagatagt
ggcgaattatactctctgaaaagactatcaggcttctaccacacgatgactcaccaattg
atattcagggtgccggagagtataaatcagcggatcattctcaccgtattcgttgcatcc
gacacctaccttggactcgatcaggaatacaatttgtatctcgaaccagaaagatag
DBGET
integrated database retrieval system
