Varroa jacobsoni: 111271512
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Entry
111271512 CDS
T07417
Name
(RefSeq) calcium-activated chloride channel regulator 1-like isoform X1
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
vja
Varroa jacobsoni
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vja04040
]
111271512
Ion channels [BR:
vja04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
111271512
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CLCA
TMEM154
Motif
Other DBs
NCBI-GeneID:
111271512
NCBI-ProteinID:
XP_022708090
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MMGRFILWVLCLIAALLLLGAGTSASRVHIDPRDKAYRGIVVTISPKIKQHHGKTIIPNL
EAILRNASSELFRVRGVFLGEVTVMIPRSWSSKGAWARQPLPRVEAPSWQQWDQADILIE
RGEDSVFGENPFAIQYGGCGVQGRHLVIPDTFLRGYAASSDYAPDRHDKYGKPYHVFLRE
WAAYRYGVFKEHGFPRDPVYPLYVLRPGSQDPKDVEVNVCTDRPVKPQFRNGKGMSCNAT
INLTNGLPLDPDCIPVFSAERDIVEASIMSGLPSATHFCGGPRPHDHALPTKQNVMCEGR
STNDIVEQHLDFFGRTYNGLLGRTRFVFVQEQAQVVAFVVQITELTMQHNRRNYILRALN
QFLRSEAPGDMQIALVTYGAVASEIALRRAAASDEGVRNAVDALLLLNAEVENGNHVNST
LEDGLRIALMALNDTSEITERVAHNTFTKRVLVIGDGHCSENFSSLLRHSYNAQGVRVDA
IIFPSRSFASTSRDPDANRQTPTTATALAVAPASQTDVMTTAVTKPKSTLSVAQPVNNIL
DEFVSRTNGRIKTVNNTPIDDTVTVSALQELYDALYAFTYLDTSAAHYDSFSCVGQAEFY
GKEQNEMVFQFDIDPTLNAELRVRLIGHDYGSDRPWTVSPKDIVLYAPAGHAANGKKVYS
PKDYKFVSTNAQFWYYEFKIPEPAVGRWRLEAKTRRDTRQPIIVSAAAKPTTDENNEPII
VDVWISQRSYNVTLWDKGLVVYAKVSKGSRPVVDVTVVARITPVSDETETEVRVELKDNG
AGDPDITKDDGIYSRYVEGITKVGRHRLIVEAKSEGSATVLRSTAVPDDVIPHTACCGSM
VMRTAQNATRRFSRRVDFGSFFVTSVALGNQQDDKTYSASWTMPARVADLHVAYLQSSPG
GSGRISLRWTASGNVRDHGRAASYILKRFDSHDEAIAHFAESGHEIDYWEFDDGLLLPKE
AGTLEQVYFELPNDILLPQYFALKVNNTYGVTSAVSNVAMISAMPPAAVTIPSIWGLGGS
QDHGGSRGYGDAKGGFAFASDQGLFGQRDGTRFLPNQFALIVTVPLIVLVLGICVIMVVF
ARRRRDPLLDKVKKATKDDKSNGVNIDTYNTGTMPKNSEGNNMSPLLTPSSIVKEDISPM
TSGSRSLPLSPSMDFNNTTVGIDHSFAVSNSNGVPALMNPMTSQQQAGLSPVNHWPADIL
LEHYDKVQGAKQRNEQPSVLTLQSGHLDETVHSTSHALCNLMDPLRGRASLATNSATSNQ
MNGSLQHLPVGVTNSIYPPYNSPAIVTPTGVHVNAPSRNITHV
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgatgggacgatttattctgtgggttttatgcttgatagctgcgcttttattacttggg
gcaggaacaagtgcctcgagagtacatatcgatcccagggacaaggcctaccgaggcatt
gtggtaactatttcaccgaagatcaaacaacatcacgggaaaaccatcataccgaacctc
gaggcgatacttaggaatgcctcatccgaacttttccgtgttcgaggagtgtttctcggt
gaggtgacggtcatgattcctcggtcttggtcctccaagggcgcttgggctcgtcagccg
cttccccgagtggaagcacccagttggcaacaatgggatcaagccgacattcttattgaa
cgcggtgaggactccgttttcggagagaaccccttcgccattcagtacggaggttgtggc
gtgcagggcaggcacctcgttattcctgacaccttcctgcgtggatacgcggccagcagt
gactatgctcccgatcgtcacgacaagtacggcaaaccttatcacgtgttcctgcgggag
tgggcagcatatcgctacggagtgttcaaggaacatggattcccacgggatcctgtttac
cccctgtatgtgctccgtcccggaagccaggatcccaaagatgtcgaagtcaacgtgtgc
accgaccggccagtaaagccacagttcaggaacggcaagggaatgtcatgcaatgctacg
atcaatttgacgaatggcctgcctttagatccagactgtattccggtattttctgctgaa
cgggatattgtcgaagcgtcgatcatgagcggtctaccgtcggccactcatttttgtgga
ggcccacgaccccatgatcatgcactgccgacaaaacaaaatgttatgtgtgagggacga
tccactaacgatatcgttgagcaacatcttgacttcttcggcaggacatacaacggactc
ctgggtcgtacgcggttcgtgtttgtccaggaacaggctcaagtagtcgcttttgttgtt
caaataaccgagttgacaatgcaacacaaccgtcgcaattacatccttcgagcactgaat
cagtttttacgcagtgaggctccaggcgatatgcagatcgctctagtgacgtacggcgct
gtcgcaagtgaaatcgccttacggagagctgccgcaagcgatgaaggtgttcgcaacgcg
gttgacgcgttgctcctgcttaatgcagaggtggaaaatggaaatcatgtgaattcaact
cttgaagacggattgcgcatagctctcatggccctcaacgatacatcggaaatcactgaa
cgtgttgctcacaacactttcaccaaacgtgttctggtcattggagatggccattgcagc
gaaaatttcagcagccttctacgacacagctacaatgcccagggagtgcgagtagatgcg
attattttcccatcacggagcttcgcctcaacgtctagggatccagacgctaaccgccaa
acccctaccactgctactgcccttgcagttgcccctgcttctcagactgacgttatgacg
actgcagtaacaaagcccaagtctactttaagtgtcgcacagcctgtgaacaatatactc
gacgaatttgtgtctagaacaaatggacggattaagactgtaaacaatacacctatagac
gacacggttaccgtcagtgcgttgcaggaactttacgacgcgctttatgcgtttacatat
ttagatacctcggcagcgcattacgatagctttagttgcgttggacaggcagagttttac
ggaaaagagcagaatgagatggtatttcagttcgatattgatcccactctcaatgccgaa
ctgcgggttcgtttgattggtcacgattacggatcagatagaccctggaccgtgtctccg
aaggacatcgttttgtacgctccagcaggtcacgcggccaacggaaagaaagtctacagt
cctaaagattataagttcgtttcgaccaacgcacagttttggtattatgagtttaagatc
cccgaacccgccgttggacgttggcgactcgaggccaaaacccgccgggatacaagacag
cccatcatagtgagtgccgccgcgaagcctaccacggacgaaaacaatgagcccatcatt
gtcgatgtctggatttcacaacgaagctacaacgtcaccctttgggataaaggccttgtc
gtctatgcgaaagttagcaaaggaagccgacccgttgtggatgtgacagtagtggccaga
attaccccagtgtcggacgaaaccgaaacagaagtacgggttgagcttaaagataatgga
gccggagatcccgatatcaccaaggatgatggaatctattccagatacgttgaaggtatc
acgaaagtcggtcgacatcgcctgatcgttgaagccaaaagtgaaggaagtgctactgtc
ctaagaagcacagctgtaccagatgacgtcattcctcatacggcatgctgcggcagtatg
gtgatgcggaccgctcagaatgcgactcgaaggttctctcgtcgcgttgacttcgggtcg
tttttcgtaacgagtgtggcacttggtaaccagcaagatgacaaaacttattcggcttca
tggacgatgcccgctcgtgttgctgacctgcacgtcgcttaccttcagtccagtcctgga
ggatctggaagaatctcgctgcgatggactgcatctggcaacgtacgagatcatggacgg
gcagcttcctatattctgaaacgattcgacagtcatgacgaagcgatagcacacttcgct
gagagcggtcatgagatcgattactgggagttcgacgacggccttttgttgccaaaagag
gcgggcaccctcgaacaagtctatttcgagctgcctaatgatatcctgctgccgcagtac
tttgctctgaaagtaaacaacacgtatggagtaacctcagctgtgtcgaatgttgctatg
atttcagcaatgccacctgcagcggttaccataccctcaatttggggtcttggtggttct
caagatcatggtggctctagaggctatggtgatgccaagggcggttttgcctttgcatct
gaccagggactgtttggccagcgggacggaactcgtttcctcccaaatcaattcgcgcta
atagttacggtgccactcatcgtacttgtccttggaatctgcgtcattatggttgttttt
gctcgccgacgacgagatccacttttggacaaggtgaaaaaggccacgaaagacgataaa
agtaacggtgtgaacattgacacatacaacactggaacgatgccgaagaactcagaagga
aataacatgagtcctctcttaacgccttcatccatagtgaaagaagatattagtccaatg
acatctgggtcacgaagtttgccgctcagcccaagcatggacttcaacaacacaacagta
ggcattgatcactcttttgcagtcagtaattcaaatggtgtcccagctttaatgaatcct
atgacatctcaacaacaggcaggtctctcaccagtcaaccattggcctgctgatatattg
ctcgagcactacgacaaagtgcagggggccaaacaacgcaatgaacagccctcagttcta
actctacaatcaggacacctcgacgagaccgttcattcgactagccacgccctctgtaac
ttaatggatcctctccgaggccgcgcgtctttagcaactaattccgccacatctaatcag
atgaatggcagtttgcagcatcttcccgtaggcgtgactaacagcatttatccgccgtac
aactctccggccatagttaccccaacaggagttcacgtaaacgcaccatctagaaatata
acgcacgtttaa
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