KEGG   Varroa jacobsoni: 111272196
Entry
111272196         CDS       T07417                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
vja  Varroa jacobsoni
Pathway
vja03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111272196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vja03400]
    111272196
DNA repair and recombination proteins [BR:vja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     111272196
SSDB
Motif
Pfam: Tyr-DNA_phospho zf-CCHH DUF7438
Other DBs
NCBI-GeneID: 111272196
NCBI-ProteinID: XP_022709235
LinkDB
Position
Unknown
AA seq 666 aa
MLLLARNRALTEIMAGPRKVHEISDSDDSDVEIVSNVPKKSRQAESPDKNSTKDSTKNDS
ASVSKISPVKLKPDTFASPRKKPQIERIPHQKPLSTAPSSSKLNTSFVSSNKTAEVVCCS
YRPVSVNGPALGSSHCFVFTKSSRKDQGLTKTSVEENDLKKNEEKCRKIQRRLQEFPPEY
SVNHLNCPSKGEPASHSAVGSDHNFESSGTKPCPYGFMCYRTSSEHLLENSHDSRLRGFY
LTKCEGLQSKFNSDTFTRSLKQILHEDVSDQLESAVHFSYVYDMEWLLEQYPPEYRQIPM
LLVVQQSDDLLKLLIAQRQVFRNVALLPIELSRFGTHHSKMISLKYKGHLRLIVTTANLY
GPDWGKKSQMLWVSPLLKKSSQPKKGQDSDTGFRSALCTYLRSYQKKKLLELAESYADYD
FSLIDNCYFIGSTPNSIKSGLVTVDSILTKNVPPLSKENPVTFCFSSIGTLGQDDTAWLR
PTFGRALLANNRTTQKGTNITDVTVNNIQALYPTIEEVRKSFEGYEAGRSLPYSGKVHMK
QRWLSKWLHRWKADQVGRSRAAPHVKFYIRTSPDYQRTFWFLMSSANLSKAAWGNLQTKA
PLSYECGILYVPNRPISTDQVVVPFDLPPQEYSSSDRLWIQDNIYNEPDDFGHSWDPRQG
GVVPTI
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgctgctattggctcgaaatagagcactaacggaaattatggcgggtccaagaaaagta
cacgaaatttcagatagtgatgacagtgatgtggaaatcgtatctaatgtgccgaaaaaa
agccgacaagcagagtcaccagataaaaattcgacaaaagattctaccaaaaatgacagc
gcttctgtctcaaagatttcgcccgtgaagcttaaacccgacacctttgcctctccaagg
aaaaagccacaaattgaacggatcccacatcagaagccgttatctaccgctccttcatcg
tcaaagttaaacacaagttttgtgtcctcaaacaaaacagccgaagttgtatgttgctca
tataggccagtttccgttaatggtccagctttaggatccagccattgcttcgtcttcaca
aaatcatccaggaaagatcagggtttgacgaaaacgtccgtggaggagaacgacttaaag
aaaaatgaagaaaaatgtagaaaaatacaaagacgcttacaggaattcccacccgagtat
tcggtaaaccatttgaactgcccatcgaaaggggaaccggcatcgcattctgcagttggc
tctgatcataatttcgagagctcaggcacaaaaccatgtccgtatggatttatgtgttat
cgcacaagctcagaacatcttctggaaaattcacatgactcgcggctacgtggcttctat
cttacgaagtgcgaaggccttcaaagcaaatttaattcggatacttttactcgatctttg
aagcaaatacttcatgaggatgtgagcgaccaacttgagtcagctgtgcacttcagctat
gtctacgatatggagtggctgttggagcagtatccgccagagtaccgacaaatccctatg
ctactcgtagtgcaacaaagtgacgaccttcttaagcttttaatagcccagagacaggta
tttcggaacgtggctttactgcctattgaactatcgcgctttggcactcaccacagcaaa
atgatttcgctgaagtataaaggacacctgcggctcatcgtaactacagctaatctctac
gggcccgactggggtaaaaaaagccaaatgttgtgggtcagtccgctcctgaaaaaatct
tcccagcccaagaaaggacaggattcagacacaggatttcgatcggcattatgcacatat
ctgcgttcataccagaagaaaaagttgcttgaactagcagaaagttatgctgactatgat
ttttcgcttatcgataactgctacttcatcggatctacaccaaattcgatcaagagcggg
ctagtgacagtggattctattctaactaagaatgttcctccgctctccaaggagaatcct
gtcacgttctgtttttccagtattggtacccttggacaagacgacaccgcttggctgaga
ccaaccttcggtcgtgcactcttggctaacaaccgaactactcagaaaggcacaaatatc
actgatgttaccgtgaacaacatacaagcgttgtatccgactatcgaagaagtccgtaag
agcttcgaaggctatgaggcaggacggagtttaccttactccggaaaggttcatatgaaa
caacgatggctgtccaaatggcttcatcgatggaaagcggatcaagtgggcaggtccaga
gcggcgcctcatgttaagttttatatacgaacatcgccggattatcagcgaacgttctgg
tttttgatgagctctgccaatctgtcgaaagcagcttggggtaatctgcaaacgaaagcg
ccactttcatacgagtgcggtattttgtatgtgcctaataggcccattagcacggatcag
gttgttgtaccattcgatttgccgccacaagaatactcgtcctcggaccgcctttggata
caggataatatctacaacgagcctgacgactttggtcattcgtgggatccacgtcaaggc
ggcgtggttccaaccatttga

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