Varroa jacobsoni: 111272484
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Entry
111272484 CDS
T07417
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
vja
Varroa jacobsoni
Pathway
vja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111272484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111272484
03036 Chromosome and associated proteins [BR:
vja03036
]
111272484
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111272484
Chromosome and associated proteins [BR:
vja03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111272484
PBAF complex
111272484
GBAF(ncBAF) complex
111272484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
ZapB
Spectrin_7
Motif
Other DBs
NCBI-GeneID:
111272484
NCBI-ProteinID:
XP_022709704
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAVDWSKSGGLIVLSNSSSGGAPPAGGNPSGPPGAGAPMGSPMRPQMMGSQMGGGPPRGT
YPAGGYPPSQGSSPRPPPQGYPSPRPSMGPPPSGGGASYGGGGRSGGGSGGGATPKRPGD
ARTGPMGARPGAGPPQPSPQQPPQSQQQQQPPKKKKKLADKILPQRVRDLVPESQAYMDL
LAFERKLDFTIMRKRLDIQESLKRPMKQKRKLRIFISNTYFPGSGGPADPADSGGPPPTD
GAVPSWELRVEGRLLEDAKEGAPKGPKRKFSSFFKSLVIELDKELYGPDNHLVEWHRTPT
TNETDGFQVKRPGDRNVRCTILLLLDYQPLQFKLDPRLARLLGIHTQTRPVIIAALWQYV
RTHHLQDQHEREFINCDKYLEQIFQCSRMKFAEIPQRLHQLLHPPDPIVINHLITVDPQD
TKKTACYDIDVEIDDALKNQMNQFVLSTSNQQEIQQLEHKIHETVETINQLKTHREFFLS
FAKDPQCFVNKWLISQSRDLKTMTDVVGNPEEERRADFYHQRWSTEAVYRYFYGKVQQKR
AELEQALGIRT
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgactggtcaaaaagcggtggcttgattgtgctttccaatagcagcagcggc
ggtgctccacccgctggtggaaatccttctggccctcctggagcaggcgcccctatgggc
tcaccgatgcgaccacagatgatgggatcccagatgggaggaggtccgcctaggggcaca
tatcccgctggtggctatccaccttcacaaggctcatccccccgacctccgccgcagggt
tatccgagtcctcggccatcgatgggtcccccgccaagtggcggcggtgcaagctacgga
ggaggtggccgatcaggtggcggaagtggtggaggcgctacccctaagcggccaggcgac
gccaggacgggcccaatgggagctcgccccggcgctggtcctccgcagccatcaccccag
caacccccccaatcacagcagcagcaacagccgccgaagaagaagaagaagctcgcggac
aaaattctgccccagcgggtccgtgacctcgtgccggaatctcaggcgtatatggaccta
ctggcgtttgaacgaaagctcgattttacaattatgcgtaagcggcttgatattcaagag
tcgttgaagagaccgatgaaacagaaacgcaaattgcgtatatttatctcaaacacgtat
ttcccaggcagcggcggaccggcagatccagccgacagcggaggcccgcctccaactgac
ggcgccgtaccctcttgggaactccgagtcgaaggccgccttcttgaggatgcaaaagaa
ggtgccccgaaaggccctaaaagaaagttctcatcgtttttcaaatcgcttgtcatcgaa
cttgacaaggagctgtacgggccagacaaccaccttgttgagtggcatcgtacgcccacc
acaaatgaaactgatggttttcaggtaaagcgtcccggcgatcgcaacgttcgctgtacc
atattgcttctcttagattatcaacctttacagttcaagctggatccacggctcgctaga
ctgttaggtattcacacgcagaccaggccagtgattatagctgctctttggcagtacgtt
cgaacgcaccatttacaagatcagcatgaacgcgagtttatcaactgtgataaatatctc
gaacagatattccagtgctcacgaatgaaattcgccgaaattccgcagcggcttcatcag
ttgctccatccaccagatcccattgtcatcaatcacctaattacggttgaccctcaggac
accaagaagaccgcctgttacgatattgacgttgaaatcgatgatgctctcaaaaatcag
atgaaccaattcgtgctgtccacatcaaatcagcaggaaattcaacaactagagcataaa
atccacgagaccgtcgagacgatcaaccaactgaaaactcatcgagagttctttctatcc
tttgcgaaagatcctcaatgctttgtgaacaagtggctcatatcacaaagccgcgacctg
aagacaatgacagacgtcgtcggaaatccggaagaagagcgcagagcagatttctaccat
cagcggtggtcaaccgaagctgtgtaccgctacttttatggcaaagtccagcagaaacga
gctgaactggagcaggcactgggtatacggacgtag
DBGET
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