KEGG   Varroa jacobsoni: 111272721
Entry
111272721         CDS       T07417                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like
  KO
K12842  U2-associated protein SR140
Organism
vja  Varroa jacobsoni
Pathway
vja03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111272721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vja03041]
    111272721
Spliceosome [BR:vja03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111272721
 Complex B
    111272721
SSDB
Motif
Pfam: Surp RRM_1 CID cwf21 CTK3
Other DBs
NCBI-GeneID: 111272721
NCBI-ProteinID: XP_022710034
LinkDB
Position
Unknown
AA seq 915 aa
MSGGRFQVKSFSLGMGTTNKRLQQQKAEKARQEEESKAAAAAYEEFVATFDDKNKPKAFV
KAGVVAPGAGERDTKRELYKPPRFEELEQRTKATPTLPPTPSENKPAKPGRKKDEPKKKS
NLEMFKEELKIIQEEREERHRLKGVIKGQLLDEPKESSHRSSRSSSSSLLSFENISTTSS
SNNEPAVARKFPGSSHDSDDPNTTNLYMSSLDPGLTEKDLCDIFGIFGPLASVKIMWPRS
DEDRKKNRNYGFVGFMSRKDAERALSVMQGKMVRGLEMRMSWSKAVVIPPVPYYIPPVMA
HLTVPPPPSGLPFNCQPPPDKAIPAEQAQCLPDDSDELKELIQASIVRVVAPSDRQLLSL
IHRMVEFVVREGPLFEALVMSKEFNNPIFRFLFDFQCPAHIYYRWRLFSILQGDHPTKYR
LKKFRMFQAGSWWKPPVQNPWTRGMPEHLFKKMESERRKDAKSEGDPATGKLEARQRAKL
EHMVRILTPEKKRIGEVMLYCIEHAFAGEEIVDLIMDSLELTETPLFKKIARLYLVSDLV
YNSNVRMPNASFYRPAFEPLVPRIIKALNATYESIEDKETADQFKQRVLNVLKAWQEWSL
YPNDFLLQMQNTFMGFDKKPLVDVDPDEDQDTSSEKDEKEKNEESETTHTELSKPEQQKI
GLAGLVGYGSDDSDQEMPTPKESEPPQPSQSAKPKFVASKWETVDPKVVEEQAVTTSKWD
MFEDDKDKEKDKEHQNRTGGRGALSAIAHDPDEDSDSETSQSVAEQDDSERRGKLRDIEC
EVLKLQDELEKKRRYTRTEIQEQCREFRAKLVRRLDDADDKTTKRDKERRGTEKSDRDKD
KDNSNSRDKNNSNTSGGSSSSKRYDSDEEQRDRKRDRSKVDKRRRSPSPVTSSRRRSSSS
PRRRSPSPYRKRNKY
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgtctggcggcagatttcaggtcaagtccttcagcctcggcatgggcacgacaaacaaa
cgtcttcagcaacagaaagcggaaaaggctcgacaagaggaagaatcaaaggcggcggct
gctgcctacgaagagttcgtcgcgacgttcgatgacaagaacaaaccgaaggcgttcgtt
aaagctggtgtcgtggcacccggcgcaggcgaacgtgatactaaacgagaattgtataag
ccgccccgtttcgaagagctcgagcagcgtaccaaggccacacctacgttaccgcctact
ccatcggagaataagccggccaagcctggccgcaagaaagatgagcccaagaagaagtct
aaccttgagatgttcaaggaggagctgaagatcattcaggaagagcgagaagaacgccac
cgcttgaaaggtgtcatcaaaggccagttgcttgatgagcctaaagaatcgtcacaccga
tcatcacggagctccagtagctccctactctctttcgaaaatatctcaacaacatcttca
tcgaacaacgagccagcagtggctcgaaagtttccaggcagctcacacgattcggatgat
ccgaacacaacaaatttgtacatgtcaagccttgatccaggcctgaccgagaaggatttg
tgtgacattttcggcatttttggtcccctcgcatcagttaaaatcatgtggcctcgtagt
gacgaagaccgaaaaaagaatcggaattacggcttcgttgggttcatgtctcgaaaggac
gccgaacgtgccctatcagtgatgcagggtaaaatggtgcgcgggctagagatgcggatg
tcgtggtcaaaagctgttgtaatacctcccgtaccctattatattccacccgttatggca
catcttacagtacccccgccaccgtcagggctgccgtttaattgtcagccgccccctgat
aaggcgattccagccgaacaagcccagtgcttgcctgatgactcagacgagctgaaggag
cttatacaagcttccattgttcgagttgtggcaccaagtgatcggcagctattgagcctt
attcacagaatggtagagttcgttgtgcgtgagggtcctctatttgaggcgctcgtcatg
agcaaagaattcaataatccgatatttcgtttcttattcgattttcaatgtcctgcacat
atatattatcgatggcggcttttctccatattgcagggtgaccatccaacaaagtaccgc
ttgaaaaaatttcgaatgtttcaagctggctcgtggtggaaaccgcctgtacagaatccg
tggacgaggggaatgccggaacatctattcaaaaagatggaatccgagagacggaaagac
gccaaatccgagggcgatccagctactggtaagcttgaggctcggcaacgagctaagctt
gaacatatggtgcgtattttgacgccggaaaaaaagcgaataggcgaggtgatgttgtac
tgcattgaacacgcattcgctggcgaagaaatcgtcgatttgattatggattcgcttgaa
cttacggagacgccattgttcaaaaaaatcgctcgattgtatcttgtatctgatcttgtt
tacaatagtaatgtacggatgccgaacgccagcttctatcggccagctttcgagcctctt
gtacctcggataataaaagcgctcaatgcaacgtacgaatcgattgaagacaaggaaacg
gccgaccagttcaagcagcgggtacttaacgttttaaaagcgtggcaagaatggtcgtta
tatcccaacgactttctgttacagatgcaaaacacgtttatgggctttgacaaaaagcct
ttagtcgacgtcgatcccgacgaggaccaggacacgagtagtgaaaaggatgaaaaagaa
aaaaatgaggaatctgaaacaacacatacagaactgtcgaagcctgagcagcaaaaaatc
ggcctagcagggctcgtcggttacggaagcgatgacagtgatcaagaaatgccgacccct
aaagaatccgaaccgcctcaaccgtcgcagtcagcaaagccgaaatttgtcgccagcaaa
tgggaaaccgtcgatccgaaagtggttgaagagcaggcagttaccacgtccaagtgggac
atgtttgaggacgacaaagacaaagaaaaggataaagaacaccaaaatcgaacaggtggt
cgaggtgcgttgtcagcgatagcacacgaccctgatgaggactctgactcggagacgagc
cagagtgtggctgaacaggatgactcagagcgtcggggaaagctacgcgatatagaatgc
gaagtactcaaactccaggatgagctggaaaagaaacggcgctatacgcgcaccgagatt
caggagcagtgtcgggagttccgagcaaagttggtccgacgcctcgacgacgccgacgat
aagacgacaaaacgcgacaaggagcgccgcggaacagaaaaaagcgacagggataaagat
aaagacaacagtaacagcagagataaaaacaacagcaacacaagtgggggcagcagtagc
agcaaacgatacgatagcgacgaggaacaacgggaccgaaagcgggatcgaagtaaagtc
gataaacggcgccggagtccatctccagtgacttcatcgcgaagacgaagttcctcgtcg
ccaagaagacggtcaccatcaccttatcgaaagcggaacaaatactag

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