Varroa jacobsoni: 111272809
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Entry
111272809 CDS
T07417
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
vja
Varroa jacobsoni
Pathway
vja03018
RNA degradation
vja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111272809
09123 Folding, sorting and degradation
03018 RNA degradation
111272809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111272809
03041 Spliceosome [BR:
vja03041
]
111272809
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111272809
mRNA degradation factors
5'-3' decay
Lsm complex
111272809
Spliceosome [BR:
vja03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111272809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
111272809
NCBI-ProteinID:
XP_022710182
LinkDB
All DBs
Position
Unknown
AA seq
117 aa
AA seq
DB search
MLVVKMSTNQGHQGQGDQKPRKKESIVDLSKYRDKLIRVKFQGGREVTGILKGFDPLLNL
VIDNTTEFLRDPDDSLKLTDDTRSLGLVVCRGTAIIVIHPQDSMEQIPNPFVQQPLD
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgttggttgtcaagatgtcgacaaatcaaggacatcaaggtcagggtgatcaaaaacct
cgaaagaaagaatcgattgttgatctttcgaaatatagagataaacttattcgtgtgaag
tttcagggtggcagggaagtcacaggaattctaaaagggtttgacccgcttcttaatttg
gtcatcgataacactacggagttccttcgtgacccagatgattcgctaaaattaacggat
gacacgcgctcgttgggccttgtcgtatgccgtgggacagccattatcgttatccacccg
caggactctatggaacaaataccaaatccgttcgtacaacagccacttgactaa
DBGET
integrated database retrieval system
