Varroa jacobsoni: 111272973
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Entry
111272973 CDS
T07417
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
vja
Varroa jacobsoni
Pathway
vja04120
Ubiquitin mediated proteolysis
vja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111272973
04120 Ubiquitin mediated proteolysis
111272973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vja04121
]
111272973
Enzymes [BR:
vja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111272973
Ubiquitin system [BR:
vja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111272973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-C3HC4_2
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-RING_Vps41
SLX1_C
FANCL_C
PHD_NSD
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
111272973
NCBI-ProteinID:
XP_022710386
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MLSFRQGLFTLGSLCVSTAVVGNAYLQKRQFYPSVVFLTKSNPCMAVIYVQAAVIVWLMA
KAMGKLFFGQLRPAEIEHLLERSWYAITETCLAFTVFRDDFSPKFIALFVLLLVLKGFHW
LAEDRVDFMERSPNISLLFHIRVLSLLALLSVLDYAFVRHAYFSVATAGASVQVVFGFEY
AILLSSVWYILIKYVLHSIDSRAETQWDNKAVLLLYTELMMSSSKVLLYATFMLVMLRIH
TFPLFAIRPMYLSIRALKRAFKDVVLSRQAINNMNTLYPDATAEELASADNVCIICREEM
QVAGAGGGVGANKKLPCNHIFHAACLRSWFQRQQTCPTCRSDVLNVSGRGTLTPGAPNHG
GGAVAAGAVAAGQRGGANLPPGAQIIPPFQIPNVQALFANWPNLHQPPNANNIPVAQQPQ
PANNNNNDNNNAQNNAEVAGPAGPGAPSPGGLNNAGTNQTRGQGANRASGVAAGVATRTA
STIISPPPPFTLLPALFLPPPPPIIPGELNLGTLSESELRAMEGNERLAVEARIQHLRNI
EVLLDAAVTMMAQYNNATTIASAVPQPAATAAQQASASGTQLASATNANSAPKQQQSAQA
GSSTGPTNVTQSTKSSTSASNTTTRFPHVDTSPTRMPDTAGSSSCSTAAANTIDASELRR
RRVEKLAGPITAAATTATAAASSNGSAINSDPGSVGLSQRGSI
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcatttcgacagggcctctttaccctgggaagcctgtgtgtatccacagcggta
gtgggaaatgcttatctacaaaaaaggcagttttatccatccgtggtttttctcacaaag
tcaaacccatgtatggccgtaatctacgttcaagctgccgtcatcgtatggttgatggcc
aaagctatgggtaagctgtttttcggacagcttcgcccagccgagatcgagcatctcctc
gagaggtcgtggtacgctataacagaaacgtgtttagcttttacagtattccgggatgat
ttctcgccaaaatttatagccctttttgtattacttctcgtcctaaagggttttcactgg
ttagccgaggaccgagtcgacttcatggagcgaagcccaaatatttctttgttgttccac
attcgtgtattgagtttgttagcgttgcttagtgtgttggattatgcgtttgttcgtcac
gcctactttagcgtcgcgaccgctggagcgtcggtgcaggtggtcttcggcttcgagtat
gcaatccttctttcctctgtttggtatatcctaataaaatacgttttacactccatcgat
tctcgtgctgagactcagtgggataataaggccgtgctccttctttacactgaactcatg
atgagctcatccaaggtattgctttacgctacatttatgcttgtcatgctgcgtatccac
actttcccgttgtttgctattcggccgatgtatctttcgatacgagcgttgaaaagggcc
ttcaaggacgtcgttctatcacgtcaggcgatcaataatatgaatacattgtatccggat
gccacggctgaggagctggcgtcggctgataatgtgtgcatcatctgccgagaagaaatg
caggttgctggagcaggaggcggtgtgggcgccaacaagaagttgccttgtaatcatatt
tttcatgcagcgtgcttacgtagttggtttcaaaggcaacagacttgcccgacatgtaga
agcgacgtgctgaatgttagtggcagaggtacgttaacacctggcgcaccaaatcacggt
ggtggggcagtagcggctggtgcagttgctgcaggtcaacgcggcggagcaaatcttcca
cctggtgcccaaattattccacccttccaaatacccaatgtgcaagccctctttgcaaac
tggcccaaccttcaccagccgccgaatgccaacaatattccagtagcccaacaaccgcaa
ccagcaaataacaacaacaacgacaacaacaacgcccaaaacaatgctgaggttgcaggg
cctgctggccctggagcgccttcacctggtggactcaacaatgccggtacaaatcaaact
aggggccaaggcgcaaaccgcgcttccggagtcgctgctggggtcgcaacacgaactgcg
tcgacaataatctcacctccgcctccgtttacgcttctacccgcgttgttccttccacca
cccccaccgattattccgggtgagctcaacctcggcacgttatcggaaagcgaacttcgc
gcgatggagggcaatgagcggcttgccgtggaggctcgaattcagcatcttcgcaatatt
gaagttctacttgatgctgctgttacgatgatggcacaatacaacaatgcaaccactatt
gcgtcggcggttccgcaacctgcagcgacagccgcacagcaagcgtcggcatctggtact
caattggccagcgctacaaatgcaaacagtgcaccaaaacaacagcagtcggcacaggct
ggctcttcgacgggacccactaatgttacgcagtcaacaaagtcttcgacgtcggccagt
aacacgacaacgcggtttcctcatgtggatacatcgccaacacgaatgccagatactgcc
ggttcctcatcgtgtagtacagctgctgcaaacacaattgacgctagcgaacttcgaaga
cgacgggtcgaaaagttggcaggaccaattacagcagcagcgacaacagcaacagctgcg
gccagttcgaacggctcggctataaattcagatccaggatcagtggggttatctcaaagg
ggctcgatttga
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integrated database retrieval system
