Varroa jacobsoni: 111273115
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Entry
111273115 CDS
T07417
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
vja
Varroa jacobsoni
Pathway
vja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111273115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vja03041
]
111273115
Spliceosome [BR:
vja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111273115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
111273115
NCBI-ProteinID:
XP_022710541
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MANRTVKDAHTVHGTNPQYLVEKIIRSRIYESKYWKEECFAVTAELIVDKGMELRYCGGV
YSGNIKPTPFMCLLLKMLQIQPEKDIVIEFLRQEDFKYIRALAAIYLRLTASALDIYKYL
EPLYNDYRKLRFQNREGTFVLNTMDQFVDELLTEERACDIILPRLQKRHVLEESSVLEPR
VSLLDDDNDDDDDDDADEIEEEAAAMEIEMQKIASRRQQRDRDNTAQGNDDRAQDRRDRR
KDNAHNNNNNNNSEKERERDRDRDRRQAIGYDSQRDGHRETDRRKRSRSRDRSRERQQQQ
RSSSRKDGGSGGGGDYHRGGHHHRSDRERERDRGDRRTDREYEKEKDRDRDRYERDQRRD
REREKDRPRERERTYGDRGDRERGDRDRYERKRSRSRSPDRYYSRKR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcgaacggtgaaagatgcacatacggttcatggaaccaatccgcagtatctt
gtcgaaaaaatcatacgctcgagaatttacgagagcaaatattggaaagaagaatgtttt
gccgtcaccgcagaattaatcgttgacaagggaatggaactacgatactgcgggggcgtg
tacagtggaaatatcaagccgaccccgtttatgtgtcttttgctaaaaatgctgcaaatt
caaccggaaaaagatatcgtgattgagtttcttcggcaagaagactttaaatatatcagg
gctctcgctgctatatatttgcgattgacagcgtcagcactggacatctacaagtatttg
gaacctctttataatgactataggaagcttcggtttcaaaaccgtgagggcactttcgtt
ttgaatacaatggatcagtttgttgatgagcttctcaccgaagaaagagcgtgcgacatc
atccttccaaggttgcaaaaacgtcatgtattagaggagtcatcagttcttgaaccacgc
gtatctttactcgatgacgataacgacgatgacgatgacgacgacgctgatgaaatcgag
gaggaggctgcagcaatggaaattgaaatgcagaaaattgcaagtcgtcgtcagcagaga
gatcgagataatactgcacaaggtaacgatgacagggcgcaagatcgacgagatcgccga
aaggacaacgctcataacaacaacaataataacaacagtgagaaggaacgcgaacgtgac
cgggatcgagaccgccgccaggcgataggttacgacagtcaaagagacggtcatcgagag
acggaccgccgaaagcgaagtcgcagtcgagacagaagccgcgaacgccaacagcagcaa
cgatcgtcgtcgcgaaaggatggcgggagtggtggaggaggtgattaccatcgaggtgga
catcatcacaggagtgatcgtgaacgggagcgagatcgtggcgatcggaggaccgacaga
gaatatgaaaaggaaaaggacagggaccgggatcgatacgagcgggatcaacggagggat
cgtgaaagagagaaagatcgaccacgtgagagagagagaacttatggagatcgaggggac
agagaacgcggtgacagggatcgatacgaaaggaagcgaagccgaagcagaagtcccgat
cgatactacagcagaaaaagatag
DBGET
integrated database retrieval system
