Varroa jacobsoni: 111273137
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Entry
111273137 CDS
T07417
Name
(RefSeq) DEAD-box helicase Dbp80-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
vja
Varroa jacobsoni
Pathway
vja03013
Nucleocytoplasmic transport
vja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111273137
03015 mRNA surveillance pathway
111273137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vja03019
]
111273137
Enzymes [BR:
vja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111273137
Messenger RNA biogenesis [BR:
vja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111273137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Queuosine_synth
SSrecog
Motif
Other DBs
NCBI-GeneID:
111273137
NCBI-ProteinID:
XP_022710554
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MSEAGGEPKVDTATSSANREKSSETKTGSQNKLETAKLNKEAGGTLAGAGDDPNVEKEVS
QSEVSYMKKLLRSKLLESKNEIEIQRSDPNSPLYSVHTFEELKLRDEFLRAIYKMNFQKP
SKIQETALPTLMADPPINMIAQSQSGTGKTATFLLASLSRVDENLRHPQILILNPTFELA
KQTADVCRQMLQFCPKIEVKFAVRGQVMPEGTVITEQIVIGTPGKMIDWAWRLKFFDVSK
IKVFVLDEADVMISETGHHDQSIRLHSRLSPSCQMMLFSATYNDEVMKFADMIIPEPCIK
ITLKREEESLENIRQFVMHTPTEDDKMRALENIYSTLPVGQAVIFCQTKMSAVKITRSMK
ELDQNVCLLMGDLAMEERVEAIERFRNGLEKVMVTTNLCARGIDIEQVSLVVNYDLPLNR
EGQPDFETYLHRIGRTGRFGKTGVAINFINPDDLKEKEHVAAIEDHFKRKILFIDFEDVD
VLQSLSSDD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagccggcggcgaaccaaaggtcgacacagccacttcttctgccaacagggag
aagtcgtcagagaccaagaccggctcgcaaaacaagctagagacagccaaactcaataaa
gaggcgggcggaacgctggctggcgcgggcgatgatcccaacgtcgaaaaggaggtgtca
caaagcgaggtttcgtatatgaaaaagctccttcgctcaaaactactggaaagcaaaaat
gagatcgaaattcagcggtcagatcctaactcgccactttactccgttcatacgtttgaa
gagctcaaattgcgcgatgaatttcttcgcgccatctacaaaatgaactttcaaaaaccg
tcaaaaatccaagaaacagctcttccaactcttatggcggatcctcccatcaatatgatt
gcgcagtcacaatccggtacagggaagaccgctacatttctgttggcgtcattgagtcga
gtggatgaaaatttgcgtcacccacagatactcattttgaacccgacttttgagctggcc
aaacaaaccgctgacgtctgtcgtcagatgctgcagttttgcccaaaaattgaggtcaaa
tttgcagtacgcggacaggtgatgcctgagggaacggtgattaccgaacagattgtgata
ggaactccaggaaaaatgatcgactgggcgtggcgattaaaattttttgacgtctctaag
atcaaggtgttcgtacttgatgaagcggacgtaatgatttcggagacaggacatcacgac
caaagcattcgcttacatagtcgcctttccccttcgtgccaaatgatgctgttttccgct
acgtataacgatgaagttatgaaattcgcggatatgatcattcctgaaccttgtattaag
atcacattgaaacgtgaagaagagtctttggaaaacatccgtcagtttgttatgcataca
cctacagaagacgataagatgcgggctcttgagaatatctattctacgctgccagtcggt
caggccgttattttctgtcaaacaaaaatgtcagctgtgaaaatcaccagatcgatgaag
gagttagatcagaatgtatgtctcctaatgggtgatcttgccatggaggaacgagttgaa
gcgatcgagcgattccgcaacggtctcgaaaaagtaatggtcaccacgaatttatgcgcc
agaggaatcgacattgagcaggtatccctggtcgtcaattacgacctgccgcttaaccgt
gaaggtcagccggacttcgagacatacctccatcgaattggacgtacgggccgcttcggt
aaaaccggcgtcgcaattaatttcattaacccggacgacctcaaagaaaaggagcatgtt
gccgctatcgaagatcacttcaaaagaaagatactttttatcgactttgaggatgttgat
gtactccaaagtctttcgtcagatgactaa
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