Varroa jacobsoni: 111273142
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Entry
111273142 CDS
T07417
Name
(RefSeq) retinal-specific ATP-binding cassette transporter-like isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
vja
Varroa jacobsoni
Pathway
vja02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111273142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vja02000
]
111273142
Transporters [BR:
vja02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111273142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
Motif
Other DBs
NCBI-GeneID:
111273142
NCBI-ProteinID:
XP_022710557
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MKRKLSMANAMVGGSELLILDEPTAGMDPQARREIWSILQDARKTRTILLTTHYMEEADV
LGDRIAFLAHGRLKCVGSPMFLKRKFNTGYKMRVAKAYPGHRSYNILDVVTSHVKGAVVE
ANMNHEIVFNLGFPPTEELVTLFHHLEDNKKRYGIATLGVAVTTMEDVFLKVGSADEDQN
NSSSSQHSPRKSYERRPQASENTERFPRFRPIYGGALTRQQFRALFVKRFNSIKRQWWMP
LLLFVLPLTLTYLFCVLDEWAYRHQIQITRTYSMKSIYGSTKSWFSSVFPQNSSRSIFKH
LEAALLEEDVSNTVIPQQDFEKYLLSLSEKDPLAYRKTMMMGVAESKKGIELWVNDQPYL
SAPSALIILQRAMLKKALKEQVTVEAATDPRDSTNVHTATLLKLIWVRFVAVFPISLATA
FLTCSIVLNPIQENISKAKLVQLMSGVSQTIYFGASFVFDGILLVVSCVCMLAIMLIYNP
LESFRVFDDTWEATLVILLLYAYAMTPMSYITSYMFTKPATGFMYLLVFNVLSGSVIVVV
MAMLDMLSMTKHNLFKLDVDALAFFLQAFNYIPSFSVVWGFVNIHVNGLSRDFCKDNRKI
MDEMCNNSLISPFVKPCCHSCEPANEFYQEGFNFCYVHTSPFAFQKRDGAGFQMLALFIV
GTVLFAVLIFMESNAQRLFCFAFDKMNKLRRKSFGGCPNINSLTNGEDDDVHKERYETER
LVRLGVAAISTEALVAHGLTKDYGRFRAVDNISFRVHEQECFGLLGVNGAGKTTTFGMLT
GDLMCTEGNAYIKDTNIRKNVQKFQKHIGYCPQGDALIDKMTGREMLHLYCALRGVPPNL
TEHLAAFIIDVADLEAHADKTTDSYSGGTKRKLSIALTLTGNPTVMFLDEPTAGVDPSAR
RKIWRTLLRAQRDMGSAIVLTSHSMEECEALCHRMCIMVNGRFRCIGSTQQLKSKYGEGF
TVLIKLAIGHEYQANEVVELMKESFPGHVILRENYQSLLHFQVTDTSLRWSVLFQRVNDI
NKMMLFEDVIVSDTTLEQIFISFAKTQRRREEDLP
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggaagctctcgatggccaatgcgatggttgggggatccgagcttctcattctg
gatgagccaacagctggtatggatccccaagcgcgtcgcgagatatggtccatccttcaa
gatgcccgtaagacccgcacaattctcttaacaacgcactacatggaggaggccgacgtc
ttgggagaccgaatcgctttcctggcacacggacgcctcaaatgcgtcggctcgccaatg
ttccttaaaagaaaatttaatacgggatacaagatgcgtgtagctaaggcttatcccgga
catcgttcgtacaacattctcgacgtggtgacatcacatgtgaagggggccgtggtcgaa
gccaacatgaatcacgaaatagttttcaacctcggatttcctcccacggaggaactggtg
acgctttttcatcatcttgaggataacaaaaagcgatatgggatcgcgacacttggtgtc
gcagtgaccacaatggaagatgtttttctgaaggtcggctccgcggacgaagatcaaaac
aacagctcctcctcacagcatagtccacggaagtcgtatgaacggcggccacaggcttcg
gagaataccgagcgatttccacgtttccgacccatctacggaggtgctctcactcgacaa
caatttagagctcttttcgttaagcgattcaactccatcaaacggcagtggtggatgccc
cttctactcttcgtgttgccattaacgctgacatatctattctgtgtacttgacgagtgg
gcctataggcatcaaatacaaattacccgaacgtactcaatgaagtcgatttacggcagc
acgaagagctggttcagctcggtttttccgcaaaatagttctcgaagtattttcaaacac
ctggaagccgctttgctcgaggaggacgtttccaacactgtgataccgcagcaagacttc
gaaaagtatcttctaagtttatccgagaaggacccccttgcctataggaaaaccatgatg
atgggcgtagccgaatccaagaagggcatagaactttgggtaaacgatcaaccgtaccta
tcggcaccttcagcattaatcatcttgcaacgggccatgctaaaaaaggccttgaaggaa
caagttactgttgaggcggccactgatcctcgagatagcacaaacgtccatactgcgact
ttgctaaaacttatttgggtgcgttttgttgccgtctttccgatctcgttggcaactgcc
tttcttacctgctcgatcgttctgaacccaattcaggagaatatatcaaaggcaaaattg
gtgcaactgatgtctggcgtgagccagacgatttacttcggagcgagcttcgtgttcgat
ggaattttgctagtagtatcatgtgtttgtatgctggccattatgcttatctacaatcca
cttgaatcgttcagagtcttcgatgacacttgggaagcgaccctggtgatattgcttttg
tatgcttatgcgatgactccaatgtcttacattacgtcgtacatgtttaccaagcccgcc
accggatttatgtacctgctcgtcttcaatgtactctctgggtctgttattgtggtcgtt
atggcgatgttggacatgttgagtatgacgaaacacaacctttttaaattggacgttgat
gcccttgctttttttcttcaagcatttaattatataccttcgttcagtgttgtgtggggc
tttgttaacatccacgtaaacggcctctcccgagatttctgcaaagataaccgcaaaatc
atggatgaaatgtgtaacaactcactaatcagtccatttgtgaagccttgctgtcattcc
tgtgaacccgcaaacgagttctatcaagagggcttcaatttctgttacgtgcacacttcc
ccatttgccttccaaaaacgtgacggggcaggctttcagatgttggcgctgtttatcgtt
ggaacagtactctttgcagtgctcatctttatggaaagtaacgcacaaagactattctgt
ttcgcttttgataagatgaataagctacgacgcaaatcgttcggcggttgtcctaacata
aattcattaactaatggcgaggacgatgatgtccataaggaacgatatgaaacagagcgg
ctggtccgcctaggcgttgcagctatttccaccgaggcgttggtagcgcatggcctcaca
aaagattacggcagatttagagctgtcgataacatttcgttccgggttcatgaacaggag
tgtttcggcctgctgggagtaaatggagctggaaaaacgacaactttcggaatgctaacc
ggtgatttaatgtgtaccgaaggcaacgcttacattaaagacacgaatatccgaaagaac
gtacaaaagttccagaagcacatcggctattgccctcaaggtgacgcactcatcgacaag
atgaccggtcgcgaaatgcttcacttatactgtgccctacgcggagtccctccaaatcta
actgagcatctggccgcattcatcatcgacgtagctgacctcgaagctcacgcagacaaa
acaaccgactcgtacagtggagggactaaacgcaaattgtctatcgccttaactctcacc
ggcaatccaacagttatgtttttggatgaacccacggccggtgtggacccgtcggctcgt
cgaaagatctggcgcaccctgttgcgggctcaacgagacatgggatcggcgatcgttctc
acgtcgcactcgatggaggagtgtgaagctctctgccacagaatgtgcattatggtaaac
ggtcgcttccgttgtatcggatcaacacagcagttaaagtcgaagtacggcgaaggcttc
actgtactgattaagttggccataggacacgaatatcaggccaacgaggtggtcgaactc
atgaaagagagcttccctggccatgttatactccgagagaactatcagagtttgctccac
ttccaggtgacagacacgtcgctccggtggagcgttctgtttcagcgcgtgaacgacata
aacaaaatgatgttgttcgaagatgtcatcgtgtcagatacaacactcgaacaaatcttc
atttcgttcgcaaaaacccagagaagacgagaagaagaccttccttga
DBGET
integrated database retrieval system
