Varroa jacobsoni: 111273263
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Entry
111273263 CDS
T07417
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
vja
Varroa jacobsoni
Pathway
vja03022
Basal transcription factors
vja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111273263
09124 Replication and repair
03420 Nucleotide excision repair
111273263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vja03021
]
111273263
03400 DNA repair and recombination proteins [BR:
vja03400
]
111273263
Transcription machinery [BR:
vja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111273263
DNA repair and recombination proteins [BR:
vja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111273263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-UDP
Mito_fiss_reg
zf-RING_2
zf-C3HC4_2
ZNF512_C2HC
TRAF3_RING
zf-RING_4
DUF4349
ECH_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
111273263
NCBI-ProteinID:
XP_022710698
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MDDVSCPRCKTTKFRNPSLKLMVNQCGHPLCEKCVEIVFIKGSGNCPSCNILLRKTGFRL
QVFDDPLVEKELDIRKKILKDMNAREEDFPTLSEYNDYLEMVENIIFKLTHNIDIEATRK
HVEQYKKDHKVMISRNRGRQSKDEQLIERLLEEEKIVSDFRSERQRREDLERRKAKLKEK
EELIDELMFSEMSAAEIVAIHDRQKQQQAEAEKEEAERARSSAPTAFSTGIKIAGQAGHS
GEFLPVPKAREHPPYEYRPLLMDTLGPVPPTEEELDDFGYLNHIREADTAEKAGGFESKI
ACQRAIQNALCGLYFEIDNL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgtttcgtgcccacgatgtaaaactacgaagtttcggaatccatcacttaag
ttgatggttaaccagtgtggccatcctctgtgcgagaaatgtgtcgaaattgtatttatt
aagggctctgggaattgtccttcatgtaatatccttttgcggaaaaccggattccgactt
caggtatttgacgatccactggtggagaaggaattagatattcgcaagaaaatcctaaaa
gatatgaatgctcgtgaagaggattttcctacgctttcagaatacaacgactatcttgaa
atggtagaaaatataattttcaagctcacgcacaacatcgatatagaagcaacgcggaag
cacgtcgaacaatacaagaaggatcacaaggttatgattagcagaaatcggggtcgccaa
agtaaagatgagcaattaattgagcgactccttgaggaggaaaaaatcgtgtcggacttc
cggagtgaacgacaacgacgtgaagaccttgagcgtagaaaagcaaaactcaaagaaaaa
gaggagctaattgatgagctcatgttttcggaaatgtctgctgccgagatcgtggccata
cacgaccgtcagaaacaacaacaagctgaagctgaaaaggaagaggcagaacgagcccga
tcttcagcaccgactgcgttttcgaccggcatcaaaatcgccggacaggccggtcattct
ggcgagttccttcctgtacccaaggcgcgggaacatcctccttatgaatatcgtccgctg
cttatggatacacttgggcccgtaccgccgacagaagaagaactggacgactttggttac
ctcaatcacattcgggaggcagatactgcggaaaaagccggcggattcgaatcgaagatt
gcctgtcaaagggctattcaaaacgctttatgtggcctgtattttgaaattgacaacttg
tag
DBGET
integrated database retrieval system
