Varroa jacobsoni: 111273762
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Entry
111273762 CDS
T07417
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
vja
Varroa jacobsoni
Pathway
vja03420
Nucleotide excision repair
vja04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111273762
09124 Replication and repair
03420 Nucleotide excision repair
111273762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vja04121
]
111273762
03400 DNA repair and recombination proteins [BR:
vja03400
]
111273762
Ubiquitin system [BR:
vja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
111273762
DNA repair and recombination proteins [BR:
vja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
111273762
TCR (transcription coupled repair) factors
Cul4-CSA complex
111273762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Lgl_C
Motif
Other DBs
NCBI-GeneID:
111273762
NCBI-ProteinID:
XP_022711423
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MSYNYIVTAHKPTAVTASVTGNFTSPTERNLIVAKNTRLEISTITIDGLKPIKEVNINGR
ISVMKKLRYPGEQKDLLFFLTDKYNVAIVEIQSEESGDVFEVITRAHGCVMDQYARASEA
GNLVVIDQPRARLIALRLYDGLLKVIPLNREARELRSYNIRMEESQIVDMCLLPTPGSGS
VAGPSGVGVAGGARSNSLHGDQPILAVIHEEQQSRHMKTHCISLREKELVKGPWSQRNLD
CEAEMLIPVDDAECGVIIVGGETIVYHWGSDYVAVAPTLMLNTQMLCYCKIDTNRYILGG
YCGRIFILVLHREGNRVTKLTLELLGDVSMAESLSYLDNGVVFVGSRLGDSQLVRIRPEA
PFVEVLESYTNLGPIIDMVVVDLEKQGQGQLVTCSGSGVCGSLRIIRNGIGIHELASVEL
SGIKGIWPLRLNTSQLNTASTPATGAIETGGVTSASRTAESVGDSSPVTQKEDTLVLSFV
GQTRVFSCSSADELEQIALPEAFDSDSQTFCTRNVIADQVVQITDRHVNLISVASKSKVF
QWRAPQDQLITQCACNDVQVVVALQNELVYLEIEEGNVKEVSRRILEHEIACLDVNPLDK
EGSRTGFVAVGLWTDVSIRILYLPDLEEVFRQDLPKDVIPRSVLKITFEGQMDCLLCTLA
DGSLFYFAIEANGQLGRQKRVTLGTQPTTLRKFRSQRTWSVFACSDRPTVIYSSNSKLVF
SKVNLREVKHMCSFSSEAFPDSLALASEDEFVIGTIDAIQKLHIRTVHLGESPKRIAYQE
DTGTFGVLVCRSAMLSANAGPTGFRCASLDAPNKSQVSAYSWQKDFSNYGHPAGGADRGD
GSAGGSGGTSSNATLHRPSSCDETYSLLILDQNTFEVLHSMQFCPNEFSVSICSARLGGD
PHPYYVVGTSFVNAEESDPKIGRLIVFRWHDNRLEMIAEKEASGAPYCIREFQQRLLVSI
NSTVRIYSWNADKDLQNECTHFHNIISLHLKCQGDYVLVGDLMRSLTLLSFNPGITSLEE
LGRDYQTNWTTAVEILDEDTFLGAETNMNLYVCKRDASANDDVRPHMNEVAQFHLGEMVN
VITRGSLVMAQPGDMPLPLNKSFLYGSVHGTVGVLVPIKQELYQLLNDVQNNLSKIIKSV
GKIDHSSWRTFVADRKVEPAVGFIDGDLIEQLLDLPREALRQVAQGISIDEDGVKRPATP
EDLVKLVEDLTRIH
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaactacattgtcacggctcacaagccaactgcagtgaccgcttcggtaaca
ggaaacttcacttcaccgacagaacgaaatctgattgtggccaagaatactcgtctagaa
atatccacaataacgattgacggcctcaagccaatcaaagaggttaacatcaatggacgc
atttcggtgatgaaaaagctacgctacccaggcgagcagaaggatctcctattctttctt
acagacaaatacaatgttgccattgttgagatacaaagtgaagagtccggtgatgtcttc
gaagtcatcacgcgggcgcatggctgtgttatggaccagtatgctcgggcctcggaagca
ggcaaccttgttgttatcgatcagcccagagcccgattgattgcgcttcgcctttacgac
ggcttacttaaggtaatacctttgaatcgggaggctcgcgagttgcgctcgtataacatt
cgtatggaggagagccaaattgtcgacatgtgtttgctgccaacaccaggaagcggatca
gtggcgggaccctcgggcgtgggggtagctggaggagctcgttcaaatagcttacacggt
gatcagcctattctcgctgttatccacgaggagcagcaaagccgacacatgaaaactcac
tgtatttcgcttcgagaaaaagaacttgtgaagggaccctggtcccaacgaaacttggac
tgtgaagcagaaatgcttattcctgttgatgatgccgaatgtggagttataatcgttggt
ggtgaaactattgtctaccattggggctccgactacgtcgcagtcgctccaacgcttatg
cttaatactcagatgctgtgctactgcaaaattgatacgaacaggtacattttgggagga
tattgcggacgcatctttatcctggtactacatcgcgagggtaaccgtgtaacgaaactt
acactcgagctattgggggacgtctcaatggccgaatccctttcatatctagacaacggc
gttgtatttgtgggttcgcgtttaggcgatagtcagttggtgcggattcgaccagaagca
ccatttgttgaagtcctggaaagctataccaatctcggacccatcatcgatatggtcgtt
gttgatctcgaaaaacagggccaaggacagctagtgacgtgctcaggttcgggcgtctgt
ggttcccttcggatcattcgtaatggaattggaattcacgagctggcctccgttgaactt
agcggcataaaaggtatatggcctctgcgtttgaacacgtcacagctcaacactgcttcc
acaccagcgactggtgcgattgaaacaggtggggtaaccagtgcttctagaaccgctgaa
agtgtaggcgactcgtcgcctgttacgcagaaagaagacactttggttctgtcattcgtt
ggtcaaacccgcgtcttcagctgtagctctgcggatgaactcgaacagattgctcttccg
gaagctttcgatagtgatagtcagacgttctgcacgcgaaacgtcattgctgaccaggtt
gtccagattactgaccgacatgtaaatctgatttccgtggccagtaaaagtaaagtgttc
cagtggcgtgctccccaggaccagctaatcacgcagtgtgcctgtaacgacgtacaagtt
gtcgtggccctccagaacgaacttgtctatcttgagatagaggagggaaatgtgaaagaa
gtgagtcgaagaatcctcgagcacgaaattgcctgtcttgatgtcaatccattggataag
gaaggcagccgtacgggctttgtcgccgttggtctctggacagatgtctcgatccgaatc
ctttacctgcctgacctcgaggaggtgttcagacaggaccttccaaaggatgttattccg
cgttcggtactaaaaattacatttgagggtcagatggattgtttgctgtgcaccctagcc
gatggttcgctcttttactttgcaattgaagcaaatgggcagctcggccgacaaaaacgg
gttactctaggaacccagcctactacgttacgaaagttcagatctcaaagaacgtggagt
gtttttgcttgttcagacagaccaacggtgatctattcgtcgaactcgaaactcgttttc
agtaaggtaaatctacgagaagttaaacatatgtgctcctttagttctgaggccttcccc
gattcgttagcattggcatcagaggatgaattcgtcattggaaccattgatgcgatccag
aaattgcatatccgaacggtccatcttggtgaatcgccaaagcgcatcgcgtaccaggag
gatacaggaacatttggtgttttagtatgtcgctccgcaatgctgtcggcgaacgctgga
cctacgggattccgatgcgcaagtctcgacgcgccaaataagtctcaagtgagcgcctac
agttggcaaaaggacttctcaaactatggccatccagcaggcggtgcagatcgaggagat
ggaagcgcggggggctcaggtggcacctcttcgaatgccacgcttcatcgtccttctagc
tgtgatgaaacgtattcactgcttattcttgatcagaacactttcgaggtgttgcactcg
atgcaattctgcccgaacgagtttagtgtgtcgatttgttcagctcgtctaggcggagac
cctcacccatactacgttgttggtacatcattcgtgaatgccgaggaatctgatccgaag
atcggtcgactgatcgtgttccgctggcacgacaaccggctagagatgatcgccgaaaaa
gaagcttctggtgcgccctattgcatccgggaatttcaacagcgtttactcgtttcgatc
aattcaacggtacgcatttactcatggaacgccgacaaagatttacagaacgaatgtacg
cactttcacaacatcatttctctacacctcaagtgtcagggggattatgtcctggtcggc
gatcttatgcgttccctgacgttactcagcttcaatcctggcatcacatctcttgaagag
ctgggccgtgattatcagaccaattggacaacagccgtggagattttagatgaagacacg
ttcttaggggccgagaccaacatgaacctgtatgtgtgtaagcgagacgcgtccgctaac
gacgacgtgcggccccacatgaacgaggtggctcaattccatttaggggagatggttaac
gtaattacaagagggagtttggtgatggcacaacctggcgacatgccactacctcttaac
aaaagctttttgtacggttcagtccacggaaccgtcggggtcctcgttccgatcaagcaa
gaactctaccagctactaaatgatgtacaaaataacctatcgaaaattatcaagtcagtc
ggcaaaattgaccacagctcctggcggacgtttgtcgctgaccgtaaggtggaaccggcg
gtgggctttattgatggtgatcttatcgaacagctactggacttgcctcgagaggctctc
agacaagtagctcaaggtatcagcattgatgaggatggcgttaagcggccggccactccg
gaagatctagttaagctcgtcgaggatctcacaaggattcactaa
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integrated database retrieval system
