Varroa jacobsoni: 111274011
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Entry
111274011 CDS
T07417
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
vja
Varroa jacobsoni
Pathway
vja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111274011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vja03041
]
111274011
Spliceosome [BR:
vja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111274011
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
HHH_2
Motif
Other DBs
NCBI-GeneID:
111274011
NCBI-ProteinID:
XP_022711830
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MSLAEELLADLEDDEPEPGDDAPQQMPSSNGAGCSSAMQIGQLLEEDALDDSNDEDGGSI
SAGKLQGFGEGHFRDEEMMEIDTNVRSVREIARLRHSPQLRDIIDEIHRLKLTPRRSEVV
GPVEADPEYALIVSANNILVEIENDLSIIHKFARDHYAKRFPELESLVPGAADYLLTVQE
IGNDLAKVKNSDRLNQILTPATVMVVSISASTSQGEPLSPSEMERVFEACEMAQQLNDMK
TEVFDFVESRMSLIAPNLSVLVGASVAAKLMGIAGGLTKLSKMPACNIQVLGASKKTSTG
FSATAMLPHTGFIFYSEHVQNYPSDLRRKAAKLLAAKCALAARVDAFHESRDGSAGEEFR
ADIEKKLDKLQEPPPIKTVKPLAAPIDIPRKKRGGRRVRRMKERYAITELRKQQNRMTFG
EIEEDAYQDDLGFSAGQAGKKGVAGRIRTAQVDEKTKVRISKTLHKNLQRQQVYGGATTV
RRHVSGTASSVAFTPLQGLEIVNPNAAESTKSQDGKYFSNNAGFLNVNNSQHK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttagctgaagagcttctcgctgatcttgaagatgacgaacccgaaccgggcgac
gatgcgcctcaacagatgcctagctcgaatggagctggctgttcctcagcgatgcaaatc
ggccaactgttggaagaagacgcgttggatgattcgaacgatgaagacgggggttccatt
tcggcggggaagctgcaagggtttggtgaaggacatttccgtgacgaggaaatgatggag
attgatacgaacgtccggtccgtcagggagattgccagactgcggcatagtccacagttg
cgggatatcatagatgaaattcatcgtctcaaactgacaccacgacgatctgaagttgtg
ggtcctgtcgaagcggatcctgagtatgctttgattgtatcagcgaataatattctggtt
gaaattgagaacgacctatctattattcataaatttgctcgcgaccactatgctaaacga
tttcctgagctcgaatcgcttgttccaggcgccgcggactatcttctcacagttcaagag
atcggaaacgacctggcaaaggtgaagaacagtgatcgcctaaatcagattctaactccg
gccactgtcatggttgtatcaatctcagcgtcgacctcacaaggtgagccactgagtcca
tctgaaatggagcgcgtttttgaggcatgtgagatggcgcaacaactcaatgatatgaag
acagaagtgttcgactttgttgaaagtcgaatgagtctcatagcaccgaatctcagtgtg
cttgtcggtgcatcggttgcagcaaaacttatggggatcgctggtggtttgaccaagctg
agcaagatgccggcatgcaacatccaagttttaggcgcatcgaagaaaacgtcaactggt
ttctcggcaacagcgatgcttccgcatacgggatttattttctactcggagcatgtgcaa
aactatccgtccgatcttcgaagaaaagctgctaagctgttggcagccaagtgcgctttg
gctgcgagggtcgacgcgttccacgaaagccgagacggaagtgccggcgaagagtttcgt
gccgacattgagaaaaagcttgacaaactccaggagccacctccaattaaaacggtgaaa
ccgcttgctgctcctatcgacattccccgtaaaaagcgcggtggccgtcgggtgcgtcga
atgaaggaacgttatgcgatcacggagcttcgtaaacaacagaatcgcatgacattcggt
gagatcgaggaggacgcgtaccaagatgatctgggtttttccgctggtcaagcaggcaaa
aagggtgtggccgggcgaattcgtacagcgcaggtagacgaaaagaccaaagtgcgcatt
tccaagacgcttcacaagaatctacaacgccaacaggtgtatggtggtgcaacaacggtt
cgaagacatgtttccggtacggcatcatcggtagcattcacacctctgcagggtcttgaa
atcgtcaatccaaatgcagctgagtcgacaaagtctcaggatggcaaatatttcagtaac
aatgctggattcctcaatgtcaacaattcacaacataagtga
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