KEGG   Vibrio japonicus: NP165_00520
Entry
NP165_00520       CDS       T08510                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
vjp  Vibrio japonicus
Pathway
vjp00300  Lysine biosynthesis
vjp00470  D-Amino acid metabolism
vjp01100  Metabolic pathways
vjp01110  Biosynthesis of secondary metabolites
vjp01120  Microbial metabolism in diverse environments
vjp01230  Biosynthesis of amino acids
Module
vjp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vjp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NP165_00520 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NP165_00520 (lysA)
Enzymes [BR:vjp01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     NP165_00520 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: UUM30706
LinkDB
Position
1:113472..114725
AA seq 417 aa
MDYFNYQDDGQLWAENVALSDLAHQYGTPLYVYSRATLERHWHAFDKSVGAHPHLVCYAV
KANSNLGVLNALARLGSGFDIVSGGELERVLAAGGDPSKVVFSGVGKTEEEMKRALELGI
KCFNVESEPELERLNKVAGALGVKAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP
EVYKFAASLKNLNVKGIDCHIGSQLTDIEPFIDATDRLLALIDDLEAQGITIEHLDVGGG
LGVVYRDELPPEPSEYAKALLGRLDNHQNLELIFEPGRAIAANAGVLLTKVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVKPREGEAVTYDLVGPICETGDFLGKDRTLVLEQ
NDLLAVRSAGAYGFVMSSNYNTRTRVAEVMVDGDQAHLVRQREELSSLWALENILPE
NT seq 1254 nt   +upstreamnt  +downstreamnt
ttggattacttcaactatcaggatgatggccagctctgggccgagaacgtcgcactatct
gatttggcgcaccaatacggcacgccactatatgtttactcaagagcgacgttggagcgc
cattggcatgcgtttgacaagtctgtcggagcacatccacatttggtgtgttatgccgtg
aaggcgaactcaaacctaggtgtgttaaacgcgttggctcgattaggttccggtttcgat
atcgtttctggcggcgagctagaacgtgtgttggctgcgggcggcgacccgagcaaagtt
gtcttctctggggttggtaaaaccgaagaggagatgaagcgagcactagagctgggaatt
aagtgttttaacgttgaatctgagccagaactggaacgtctgaataaagtagcaggagcg
ttaggagtgaaagcgcctatctcgctgcgcattaatccagatgtcgacgcaaatactcac
ccttatatttccactggactgcgtgacaacaagtttggtatcgcatttgaccgagctcct
gaagtttacaagtttgcagcgagcctaaagaacctgaatgtcaaaggtattgattgccac
attggctctcagctgacagatatcgaaccatttattgatgctacggaccgcctgctagct
ctgattgatgatctggaagcacaaggtatcactattgagcatttagatgtgggcggtggc
ctaggtgttgtttaccgagatgaactccctcctgagccgtcagagtacgcaaaagcgtta
ttgggtcgtctagataaccaccaaaatctggaattgatctttgagcctgggcgtgcgatt
gctgccaacgcaggtgttctcctgaccaaagtcgagttcctaaagcataccgagcacaag
aacttcgccattattgatgctgcgatgaatgacttgatgcgcccagcgctttatcaagca
tggcaagacattgtgccagtaaaacctcgtgaaggtgaggcagtaacctacgacttagtc
ggaccaatttgtgagacgggtgacttccttggcaaagatcgtacgttggtactggagcaa
aatgatttgctagctgtacgttcagcaggtgcgtatggctttgtcatgtcatcgaactac
aacacacgtactcgcgttgctgaagtgatggtggatggcgatcaggctcacttagtgcgt
cagcgtgaagagctgtctagtctatgggcgttagagaacattcttccggagtaa

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