Vibrio japonicus: NP165_00520
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Entry
NP165_00520 CDS
T08510
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vjp
Vibrio japonicus
Pathway
vjp00300
Lysine biosynthesis
vjp00470
D-Amino acid metabolism
vjp01100
Metabolic pathways
vjp01110
Biosynthesis of secondary metabolites
vjp01120
Microbial metabolism in diverse environments
vjp01230
Biosynthesis of amino acids
Module
vjp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NP165_00520 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NP165_00520 (lysA)
Enzymes [BR:
vjp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NP165_00520 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UUM30706
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Position
1:113472..114725
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAENVALSDLAHQYGTPLYVYSRATLERHWHAFDKSVGAHPHLVCYAV
KANSNLGVLNALARLGSGFDIVSGGELERVLAAGGDPSKVVFSGVGKTEEEMKRALELGI
KCFNVESEPELERLNKVAGALGVKAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP
EVYKFAASLKNLNVKGIDCHIGSQLTDIEPFIDATDRLLALIDDLEAQGITIEHLDVGGG
LGVVYRDELPPEPSEYAKALLGRLDNHQNLELIFEPGRAIAANAGVLLTKVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVKPREGEAVTYDLVGPICETGDFLGKDRTLVLEQ
NDLLAVRSAGAYGFVMSSNYNTRTRVAEVMVDGDQAHLVRQREELSSLWALENILPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaactatcaggatgatggccagctctgggccgagaacgtcgcactatct
gatttggcgcaccaatacggcacgccactatatgtttactcaagagcgacgttggagcgc
cattggcatgcgtttgacaagtctgtcggagcacatccacatttggtgtgttatgccgtg
aaggcgaactcaaacctaggtgtgttaaacgcgttggctcgattaggttccggtttcgat
atcgtttctggcggcgagctagaacgtgtgttggctgcgggcggcgacccgagcaaagtt
gtcttctctggggttggtaaaaccgaagaggagatgaagcgagcactagagctgggaatt
aagtgttttaacgttgaatctgagccagaactggaacgtctgaataaagtagcaggagcg
ttaggagtgaaagcgcctatctcgctgcgcattaatccagatgtcgacgcaaatactcac
ccttatatttccactggactgcgtgacaacaagtttggtatcgcatttgaccgagctcct
gaagtttacaagtttgcagcgagcctaaagaacctgaatgtcaaaggtattgattgccac
attggctctcagctgacagatatcgaaccatttattgatgctacggaccgcctgctagct
ctgattgatgatctggaagcacaaggtatcactattgagcatttagatgtgggcggtggc
ctaggtgttgtttaccgagatgaactccctcctgagccgtcagagtacgcaaaagcgtta
ttgggtcgtctagataaccaccaaaatctggaattgatctttgagcctgggcgtgcgatt
gctgccaacgcaggtgttctcctgaccaaagtcgagttcctaaagcataccgagcacaag
aacttcgccattattgatgctgcgatgaatgacttgatgcgcccagcgctttatcaagca
tggcaagacattgtgccagtaaaacctcgtgaaggtgaggcagtaacctacgacttagtc
ggaccaatttgtgagacgggtgacttccttggcaaagatcgtacgttggtactggagcaa
aatgatttgctagctgtacgttcagcaggtgcgtatggctttgtcatgtcatcgaactac
aacacacgtactcgcgttgctgaagtgatggtggatggcgatcaggctcacttagtgcgt
cagcgtgaagagctgtctagtctatgggcgttagagaacattcttccggagtaa
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