Vibrio japonicus: NP165_00660
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Entry
NP165_00660 CDS
T08510
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vjp
Vibrio japonicus
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vjp03021
]
NP165_00660 (rpoH)
Transcription machinery [BR:
vjp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NP165_00660 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_25
UCR_14kD
MerR
HTH_10
GntR
Motif
Other DBs
NCBI-ProteinID:
UUM30732
LinkDB
All DBs
Position
1:136894..137751
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AA seq
285 aa
AA seq
DB search
MANQAYPMAVVTQDSLDSYIRTVNSYPMLTADEERGLAERLHYDGEIEAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPSEVREMESRLAAQDA
TFEMPSDDDDSVSSYTAPMLYLEDKSSDVADNIEADNWEAHTNNRLSLALASLDERSQHI
VRSRWLDDTKATLQELAEMYGVSAERIRQLEKNAMKKLKTAVGDF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccaagcatatccaatggcagtagttacacaagatagcttagacagctatatc
cgcacagtgaacagttaccctatgctgaccgctgatgaggagcgtggacttgctgaaaga
ctacattacgacggtgaaattgaggcggcaaaaggtttgatcctttcgcacctacgtttt
gttgtgcatgtcgctcgtggttattctggttatggtctacctatggccgacttagtccaa
gaaggtaatattggtctaatgaaggcggtaaaacgctttaacccagaagtgggcgtgcgt
cttgtctcatttgctgttcactggatcaaagctgagatccacgagtatgtactccgcaat
tggcgcatcgtaaaaattgcgacaaccaaagctcaacgaaaattgttcttcaaccttcgt
aaatcaaagaagcgtttaggttggttcaataacggtgaagtagagaccgtggcgagagaa
ctcggtgttgagccttctgaagtacgagaaatggaatcgcgcttagcggctcaggatgca
acgtttgagatgccaagtgacgatgatgactcagtatcgtcttacactgcaccaatgctg
tatttagaagataaatcttcggacgtggctgacaatattgaagcggataactgggaagca
cataccaataatcgtttgagtttggctcttgcgagcttagacgaacggagccagcacatt
gtccgttctcgctggctagatgatacaaaagcaacactgcaagaattagccgaaatgtat
ggtgtgtctgctgagcgtattcgccagcttgaaaagaatgcgatgaagaaattgaaaact
gcagtaggcgatttctaa
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