Vibrio japonicus: NP165_02630
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Entry
NP165_02630 CDS
T08510
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vjp
Vibrio japonicus
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vjp03016
]
NP165_02630 (truB)
Enzymes [BR:
vjp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NP165_02630 (truB)
Transfer RNA biogenesis [BR:
vjp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NP165_02630 (truB)
Prokaryotic type
NP165_02630 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UUM31063
UniProt:
A0ABY5LG85
LinkDB
All DBs
Position
1:542506..543444
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AA seq
312 aa
AA seq
DB search
MARRRKGRPIDGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPIDVDLAKLEACIDKFRGESDQ
IPSMFSALKYQGKPLYEYARQGIEVPRESRKITVYEIVLHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTAVAKYPYEKMVTLEQLNELLEQAHREEKAPRELLDPLL
MPMDSAVEDLPEVNLIPDLANMVQHGQPVQVFGAPTEGPVRLTMGEEKLFIGVGEMNDDG
KIAPKRLVVFRD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtcctatcgatggtgtgatccttctggataaacctacc
gggatttcatctaacgacgcactgcaaaaagtaaagcgtatttactttgctgaaaaagca
ggtcataccggtgcacttgacccgttggcgactggcatgttgccaatctgtcttggtgaa
gcgaccaaattttcgcagtttttgctcgattcagataaacgctaccgagtgatcgctaag
ctaggcgaacgcaccaatacgtcagattcagatggtgaagtggtagaaacacgtccaatt
gatgtggatcttgctaagctagaggcgtgcatcgataagttccgaggtgaatcggatcaa
atcccgtcgatgttctcggcgctgaaataccaaggtaagccactttatgagtacgctcgc
caaggtattgaagtaccgcgtgaatcacgcaaaatcaccgtttacgaaatcgtactgcat
cgttttgaaggcgatgaagttgaaatggaagtacactgctcaaaaggtacttacattcgt
acaatcgtcgacgatttaggtgagatgctgggttgtggtgctcacgtgactatgctgcgc
cgtactgcggttgctaagtatccgtatgagaaaatggtcacgttagagcaactgaacgag
ttgttagagcaagcgcatcgtgaagaaaaagcgccgcgcgaattgcttgacccacttctg
atgccgatggatagcgcggttgaagatcttcctgaagtgaacctgatccctgatttggca
aacatggttcaacatggtcagccagtgcaggtgtttggtgctccaacagaaggccctgtt
cgcttgacaatgggtgaagaaaagctgtttatcggtgtgggagagatgaacgatgacggt
aagatcgcaccaaagcgacttgttgtatttcgtgactaa
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