Vibrio japonicus: NP165_02825
Help
Entry
NP165_02825 CDS
T08510
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vjp
Vibrio japonicus
Pathway
vjp00470
D-Amino acid metabolism
vjp00550
Peptidoglycan biosynthesis
vjp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NP165_02825 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NP165_02825 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vjp01011
]
NP165_02825 (murD)
Enzymes [BR:
vjp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NP165_02825 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vjp01011
]
Precursor biosynthesis
Amino acid ligase
NP165_02825 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_9
Pyr_redox_2
DAO
Thi4
NAD_binding_8
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UUM31100
LinkDB
All DBs
Position
1:591235..592560
Genome browser
AA seq
441 aa
AA seq
DB search
MTMDRWQNIHSVVVVGLGITGLSVVKYLAKLPNELTIKVIDTRENPPGQDALPDGVELHS
GGWNLEWLLAADLVVTNPGIALATPEIQQVLAADIPVVGDIELFAWSVEKPVIAITGSNG
KSTVTDLTGVVAKATGLKVGVGGNIGVPALELLNEDADLYVLELSSFQLETTSSLNLKAA
AFLNLSEDHMDRYEGMEDYRQAKLRIFDHAESCIVNADDRATYPENTKDNLVEFSLTQAT
QFGVADIEGREFICRNGKPLLATDELTLVGRHNVANVLVVLALLLESGIDVEQGMNALKS
YNGLTHRCQIVADNHGVKWVNDSKATNVASTLAALSGLSLQGKLYLLVGGVGKGADFSEL
APVFSTLDLQLCCFGEDGDQFMSLHPSARRFDTLEQIVEWVSPKLENGDMVLLSPACASF
DQFSNFMARGDAFTELAKTYA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggatcgttggcaaaatattcatagtgtcgttgtagtagggctcggtatcacc
gggctctctgtcgttaaatacctggcaaaattgcctaacgaattaacgattaaagtcatt
gatacacgagagaatccacctggacaagatgcgttgcctgatggggtagaactgcattca
gggggctggaatctagaatggttgctcgcggctgacttggttgtgacaaatccggggatc
gcgttggcgacgcctgaaattcagcaagtgttggccgcagacattcctgttgttggtgat
attgagcttttcgcttggagcgtagagaagccggttattgcgatcactggctctaacggc
aaaagcaccgtaaccgatctgaccggggttgtggcgaaagcgacaggtctgaaagtggga
gtgggtggtaacatcggagtaccagcgttggagctgttaaatgaagacgctgatctatac
gttctggagctttcgagctttcagctggagacgacctcctcgcttaacctaaaggcagca
gcatttctcaacctttctgaagatcatatggaccgatatgaaggcatggaagattatcgc
caagctaaacttcgtatctttgatcatgctgaatcctgcattgtgaacgctgatgaccga
gcgacttatcctgagaatacaaaggacaatctggttgaatttagcctgacacaagccacg
caatttggcgtcgcagatattgagggcagagagtttatttgccgaaatggaaaaccatta
ttggcgacggatgagttgacactggttggtcgacacaacgtagcaaacgtactagtggtg
ttagcattgttgcttgagtctggcattgatgttgagcagggaatgaatgcactcaagtct
tacaacggcttgacacatcgctgccagatagttgcggataatcatggtgttaagtgggtg
aacgattctaaggctaccaacgttgctagtaccttggcagcactttcaggcctgagcttg
caaggaaagctctatttactggtaggtggtgttggtaagggcgcagatttctctgaattg
gcaccggttttctctactttagatttacagctgtgttgctttggggaagatggcgatcaa
tttatgtctctccatcctagcgcgcgtcgctttgatacattagagcagatcgtggagtgg
gtatcgccaaagttggagaatggagatatggtattactttcccctgcgtgtgccagtttc
gatcagtttagcaactttatggctcgtggtgacgcattcactgaacttgcaaagacttac
gcctaa
DBGET
integrated database retrieval system
