Vibrio japonicus: NP165_02910
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Entry
NP165_02910 CDS
T08510
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vjp
Vibrio japonicus
Pathway
vjp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NP165_02910 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vjp03400
]
NP165_02910 (nfo)
Enzymes [BR:
vjp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NP165_02910 (nfo)
DNA repair and recombination proteins [BR:
vjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NP165_02910 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UUM31117
LinkDB
All DBs
Position
1:613346..614230
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AA seq
294 aa
AA seq
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MLKKPSGNKFIGAHVSAAGGVDQAPIRAKEIGANAFALFTKNQRQWAAKPLEEKTIRAFK
ANCQMLGYKSEQILPHDSYLINLGAPEEEKLNKSREAFIDEMKRCQQLGLSLLNFHPGSH
LKKISEQECLSKIAESINLAHQAVPDVIAVIENTAGQGTNLGWKFEHLSEIIEQVEDKGR
VGVCLDTCHTFAAGYDLRSHDACDATFSEFERIVGMHYLRAMHINDSKSILGSRVDRHHA
LGKGEIGWDCFEYIARDSRFDGIPLILETIEPEIWKDEIAQLRRFHLESLKESV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaagccgtctggaaataaatttattggtgctcatgtatcggcagcaggtggt
gtcgaccaagcacctatacgggcaaaagagattggtgcgaatgcgtttgctctgtttacg
aaaaatcagcgccaatgggcagccaaaccgttagaagagaagacgattcgagcttttaag
gctaattgccaaatgcttggttataaaagtgagcaaatccttcctcatgactcttacctg
ataaatctcggtgcgccggaagaggaaaaactcaataagtccagagaagcgtttattgat
gagatgaaacgatgccaacagcttgggttgtctctattgaattttcatcctggtagccac
ctgaagaaaatatctgagcaggaatgcctaagtaaaattgccgaatctattaaccttgcg
catcaagctgtgccagatgttattgctgtgattgaaaacaccgctggtcaggggacgaac
ttaggatggaagtttgagcacttatctgaaattatcgaacaagttgaggacaaggggcgc
gttggagtctgtcttgatacctgccatacctttgcggctggctatgacttacgatcgcat
gatgcatgtgacgcaacgttttcagagttcgaacggatagtcggaatgcactatcttaga
gcaatgcacatcaatgactcaaaatcgatacttggcagtagagtcgataggcaccatgct
ttagggaagggagagattggatgggattgctttgaatatatcgcgagagactcgcgcttt
gatggtatccctttaatcttagagacaattgagcctgagatatggaaagatgagatcgcg
caattacgtcgttttcaccttgaatcgttaaaagaaagcgtttag
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