Vibrio japonicus: NP165_04030
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Entry
NP165_04030 CDS
T08510
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
vjp
Vibrio japonicus
Pathway
vjp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NP165_04030 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vjp03400
]
NP165_04030 (uvrB)
DNA repair and recombination proteins [BR:
vjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NP165_04030 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NP165_04030 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
AAA_22
UB2H
Peptidase_M41
Motif
Other DBs
NCBI-ProteinID:
UUM31312
UniProt:
A0ABY5LKL1
LinkDB
All DBs
Position
1:819458..821488
Genome browser
AA seq
676 aa
AA seq
DB search
MNKEFDLVSDYQPSGDQPTAIQQLLEGLDSGLAHQTLLGVTGSGKTFTLANVIAQAKRPT
ILLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPQAYLQMMLHIRRGDVMDQRDILRRLAELQ
YSRNDVAFERGQFRVRGEVIDIFPAESDQDAVRIEMFDDEIDCISVFDPLTGVVKQRDLP
RYTIYPKTHYVTPRDRILEAIENIKVELDGRKKYLLENNKLLEEQRISQRTQFDIEMMTE
LGFCSGIENYSRYLSGRSEGEPPPTLFDYLPHDGLLVIDESHVTVPQIGAMYKGDRSRKE
TLVEFGFRLPSALDNRPLKFEEFESLAPQTIFVSATPGNYELEKSDSEIADQVVRPTGLL
DPELEVRPVSTQVDDLLSEIRIRAAKDERVLVTTLTKRMAEDLTEYLTEHDVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNVSGKAILYADSITKSMKKAMDETNRRREKQRAYNEKMGIEPQALKRNIKDIMEL
GDITKGKKQRANKPVPLSKVAESSQSYSVMTPQQLDKEISKLEAQMYQHAQDLEFELAAE
KRDQIEKMRQQFIANS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagtttgatttggtatcggattatcaaccgtcaggcgatcagccaactgcg
attcaacagctcctggaagggttagattctgggttggctcaccaaactctactcggggtg
acgggatcaggcaaaacgttcactttagccaatgttatcgcccaggcgaaacgcccgact
atcttactggcaccgaataaaactctggccgctcaactctatggggaaatgaaatcattt
ttccctaacaatgccgtcgaatactttgtctcttactacgattactatcaaccagaagcg
tatgttccaacaacggatacgtttattgagaaagatgcttctgtcaatgcgcatattgag
cagatgcgtctgtccgcaaccaaagccttattagagcgtaaagacgccatcatcgttgca
tcggtttcggctatttatggtcttggggatcctcaagcgtatctacaaatgatgctgcat
attcgtcgcggagatgtaatggatcagcgggatatacttcgccgcttagctgaattgcaa
tacagccggaacgatgtcgcttttgaacggggtcagttccgtgtgcgtggtgaggtcatt
gatatctttcctgcggagtcggatcaagacgcggttcgcatcgaaatgtttgatgatgaa
attgactgtattagtgtctttgatcctctcactggtgtggttaagcagagagaccttccg
cgttacaccatctatccgaaaactcactatgtcacgccaagagaccgtattctagaagcc
atcgaaaacattaaagttgaacttgatggtcgcaaaaagtatttgcttgaaaataacaag
ttgttggaagagcaaaggatcagtcaaagaacgcagttcgacatagaaatgatgaccgaa
ctcggattttgctccggtattgagaattactcgagatacttaagtggtcgtagcgaaggt
gagccgcctccgacgctatttgattacttacctcatgatggccttctcgtcattgatgag
tcacacgtaaccgtgccgcagattggcgctatgtataaaggtgaccgttcccgaaaagaa
acgctggtggagtttggctttcgattgccgtctgcattggataaccgaccacttaagttt
gaggaatttgagtcattagcaccccaaactattttcgtatcagcaacgcccggtaactat
gaattagaaaagtcagacagcgagatcgcggatcaggtggttcgtccaacaggattgttg
gatccagagttagaagttcgcccagtcagcactcaggttgatgatcttctttcagagatt
cgtatccgagcggcaaaagatgaacgtgtacttgtgacaacactgacgaaacgcatggcg
gaagatttgacagaatacctaactgaacatgatgtcaaagtgcgttatctccactctgat
attgatacggttgaacgagtcgaaatcatacgcgacctgcgtttaggtgagtttgatgtg
cttgtcggtattaacttgctgcgagaaggtttggacatgccagaggtttctttggtcgcg
attcttgatgcagataaagaaggtttcctacgatcggaacgctcacttatccagaccatt
ggccgagctgcacgtaatgtaagtggtaaagccattttgtacgcagactcaatcactaaa
tcgatgaaaaaagcgatggatgaaaccaatcgtcgtcgtgaaaaacagcgagcctacaat
gagaaaatgggtatagagccacaagcgttaaaacgtaatatcaaagatattatggaactt
ggtgatatcactaagggcaagaaacaacgtgcgaacaaaccggttccgctttctaaggtg
gcagaaagttcacaaagttactcagtgatgacaccacagcagctagacaaagagatcagc
aaactggaagcgcagatgtatcagcatgctcaagaccttgaatttgaattggcggcagag
aaacgagatcaaatagagaagatgcgccagcagtttattgcaaatagctga
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