KEGG   Vibrio japonicus: NP165_04345
Entry
NP165_04345       CDS       T08510                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
vjp  Vibrio japonicus
Pathway
vjp02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vjp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NP165_04345
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vjp02022]
    NP165_04345
Two-component system [BR:vjp02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   NP165_04345
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA Mg_chelatase AAA_2 AAA_22 AAA_3 AAA_7 AAA_16
Other DBs
NCBI-ProteinID: UUM31369
LinkDB
Position
1:complement(884321..885661)
AA seq 446 aa
MEDVFFIDDESDIRLAIEQSFELEDISARFFACAEDAMLAIKQQGMPKVVITDICLPGLS
GENLLSTVLNQDSDVPVILITGHGDISMAVNALRNGAYDFIEKPFAIDRLIDTTKRGIEK
RELTLENQELKRSLKASQTLGPRIIGDTPAIGSLRDTILHIADTNADILLFGETGTGKEL
FARSIHEQSSRRDANFVAINCGAVPENLIESELYGHEKGAFTGADAKRIGKFEHAQGGTL
FLDEVESMPMQAQIRLLRVLQERVIERVGSNALIPVDIRVIAATKTDLKKASQEGTFRED
LYYRLNVVTLDLPPLRQRKEDIPALFHHFLLVAASRYGKAANVLPDADLQTLMSHDWPGN
VRELRNSAERFVLLGNLGHLNPESPSQISTPLAVQVAEFEKTIIEQALSSSNGRINDALD
ILQVARKTLYDKMQKYGLDKSDYKPE
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggaagacgtattttttatcgacgatgaaagtgacatacgattagcgattgaacagagc
tttgagcttgaagatatttcggcgcgtttttttgcctgcgcagaagatgcgatgctggcg
ataaagcaacaaggcatgcctaaagttgttattaccgatatctgcttgccgggtttgtct
ggcgaaaacctgttatcgacggtgctcaaccaagacagtgatgtacctgttattttgatt
accggccacggtgatatttccatggctgtcaatgcactcagaaatggcgcttatgacttt
attgaaaagccgtttgctatcgacaggctaattgataccaccaagcgcggaattgaaaaa
cgtgaactaacgttggaaaatcaagagctcaaacgcagccttaaagcaagccaaaccctt
ggtccgcgtatcattggtgacaccccagcgataggttctctgcgtgacactatcctacac
attgccgatacgaatgctgacattttgttgtttggagaaacagggaccggtaaagaactg
tttgctcgctctattcatgaacaaagctcacgccgagacgcaaacttcgtcgcgatcaac
tgtggtgcagttcctgaaaatctgattgaaagtgaactctatggccacgaaaaaggcgcg
tttaccggtgcagatgcaaaacgtataggcaaatttgaacacgcccaaggcggtacgcta
tttttagacgaagttgagtcaatgcctatgcaggctcagatccgcttactcagagtgtta
caagagcgtgtcattgaacgtgtggggtcaaacgcattgattcctgtcgatattcgcgtt
atcgcggcaacgaagactgatctcaaaaaagcgtcgcaggaagggacgtttcgtgaagac
ttatattatcgattgaatgtggtcacattagatctacctcctcttcgacaaagaaaagaa
gatatccccgctctgttccaccactttcttttggttgctgcgtctcgatatgggaaagcg
gccaatgtgctgcccgatgcggatctgcaaacgttaatgagtcatgattggccgggtaat
gttcgtgagctacgaaacagcgcagaacgattcgtactgctgggtaacctcggacactta
aatcccgaatctccatctcaaatctctaccccactggcggtgcaggtggcggagtttgaa
aagaccatcattgaacaggcgctttcgagcagtaatggccgaataaacgacgccttagat
attcttcaagtcgcacgaaaaacactgtatgacaagatgcaaaaatatgggttggataag
agcgattataagccggagtga

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