Vibrio japonicus: NP165_04375
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Entry
NP165_04375 CDS
T08510
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vjp
Vibrio japonicus
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vjp03032
]
NP165_04375
03036 Chromosome and associated proteins [BR:
vjp03036
]
NP165_04375
03400 DNA repair and recombination proteins [BR:
vjp03400
]
NP165_04375
DNA replication proteins [BR:
vjp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NP165_04375
Chromosome and associated proteins [BR:
vjp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NP165_04375
DNA repair and recombination proteins [BR:
vjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NP165_04375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Arteri_nsp7a
HU-CCDC81_euk_1
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
UUM31375
LinkDB
All DBs
Position
1:894082..894354
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLVEKIAENADLSKASAGRALDAFIDAVGDTLQTGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQIAEAKVPSFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaacacaattagtagaaaaaatcgcagaaaacgcagatctatctaaagcatct
gctggtcgcgctctagatgcatttatcgacgcagttggtgatacattgcagactggtgat
caagtagcactagtcggttttggtacgttcagcgttcgcactcgtgcagcacgtactggt
cgtaaccctaaaactggtgaagagatccaaatcgcagaagcgaaagtaccttctttcaaa
gctggtaaagcactaaaagacgcttgcaattaa
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