Vibrio japonicus: NP165_04560
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Entry
NP165_04560 CDS
T08510
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vjp
Vibrio japonicus
Pathway
vjp00061
Fatty acid biosynthesis
vjp00071
Fatty acid degradation
vjp01100
Metabolic pathways
vjp01212
Fatty acid metabolism
vjp02024
Quorum sensing
vjp04146
Peroxisome
Module
vjp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NP165_04560 (fadD)
00071 Fatty acid degradation
NP165_04560 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NP165_04560 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NP165_04560 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vjp01004
]
NP165_04560 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vjp04147
]
NP165_04560 (fadD)
Enzymes [BR:
vjp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NP165_04560 (fadD)
Lipid biosynthesis proteins [BR:
vjp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NP165_04560 (fadD)
Exosome [BR:
vjp04147
]
Exosomal proteins
Exosomal proteins of breast milk
NP165_04560 (fadD)
Exosomal proteins of breast cancer cells
NP165_04560 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UUM31411
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All DBs
Position
1:937305..938993
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AA seq
562 aa
AA seq
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MDKPWLSRYPSDVPEHINPDQYPSLVEMFEQSVQKYADQPAFMNMGSVMTFRKLEERSRA
FAAYLQNELKLKKGDRVALMMPNLLQYPVALFGVLRAGCIAVNVNPLYTPRELEHQLNDS
GAKAIVIVSNFANTLEQIVDNTSVKHVVLTSLGQMLPRAKGTLVDFVVKYVKGMVPKYNL
PGAISMRKALSQGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMIANVLQAKG
AYGPILSEGRELVVTALPLYHVFALTVNCLLFVEMGGRNLLITNPRDIPGFVKELQKYPF
TAITGVNTLFNALVNNEDFHELDFSNLKLSVGGGMAVQRAVADQWQKTTGIHLLEGYGLT
ECSPLVTGNPYDLTEYTGAIGLPVPSTEVRIVDDEGNELPATEVGELQVRGPQVMQGYWQ
RPEATKEVINADGWLSTGDIVKFDDEGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQEHPVSGEVVKIYVVKRDPSLTKDEIIAHCRQHLTGYKVPKLVEFKEDLPKT
NVGKILRRQLREENEANLAKVS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccttggttatcacgttacccaagcgatgtgccagagcacatcaacccagat
cagtatccgtcgctggtcgagatgtttgaacaatcggtacaaaagtacgcagaccagcct
gcatttatgaatatgggctcggtaatgacattccgtaagcttgaagagcgcagccgtgct
tttgccgcttatctgcaaaatgagctaaagcttaagaaaggcgaccgcgtcgcgttaatg
atgccaaacttactgcaatacccagtggctctgtttggtgtgttgcgtgcgggttgtatt
gcggtaaacgtgaaccctctgtacacgccacgtgaacttgagcaccagttaaacgattcg
ggtgcaaaagccattgttatcgtttctaactttgctaatacactagagcaaattgtcgat
aacacgtcagttaaacatgtcgtccttactagtcttggtcaaatgctaccacgcgctaaa
ggtacgcttgttgatttcgtcgtgaagtacgttaaaggtatggtgcctaaatataaccta
ccgggtgccatctctatgcgaaaagcgttgagtcagggccgtcgtttgcagtatgtgaag
ccatttatgtctggcgaagacatcgcatttttgcagtacactggcggtacgacaggtgta
gcaaaaggagcgatcttaacgcaccgcaacatgatcgctaacgtgctgcaagcgaaaggc
gcgtatggtccgatcttgtctgaaggtcgtgaacttgttgtcacggcgcttccgctatat
cacgtatttgcactgacagtgaactgcctattgtttgtcgagatgggcggtcgcaacttg
ctcatcacaaacccgcgtgatattccaggttttgtcaaagagctacaaaagtacccattc
actgcgattacaggtgtaaacacgctgtttaatgctctagttaacaatgaagacttccac
gaacttgattttagcaacctaaagctgtctgttggtggcggtatggcggtacaacgagcc
gttgcagaccaatggcaaaaaacaacaggcatccacctgctagaaggttatggcctgaca
gagtgttcaccgctagttacgggcaacccatatgacttgactgagtatacaggcgcgata
ggtttaccagtgccttcaaccgaagttcgtattgtggatgacgaaggcaatgaattgcct
gcgacagaagtcggtgaactacaagtgcgaggcccacaagtcatgcaaggttactggcag
cgcccagaagcaaccaaagaagtgattaacgcggatggttggctatcgacgggtgatatc
gttaagtttgacgacgaagggctgattcatattgtagaccgcaagaaagatatgattttg
gtatcaggcttcaacgtttatccaaatgaaattgaagatgtggttgctttgcatgggaag
gtgcttgaagtagcagccattggtcaagagcacccagtatccggtgaagtggtgaagatt
tatgtcgttaagcgtgatccgagcttaaccaaagatgagatcattgcacactgtcgccaa
cacctaacaggttacaaagtgccaaaactggttgagttcaaggaagatctaccaaagaca
aacgttggtaagatcctgcgtaggcagctacgtgaagaaaacgaagccaatttagcgaaa
gtgtcgtaa
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