Vibrio japonicus: NP165_05190
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Entry
NP165_05190 CDS
T08510
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vjp
Vibrio japonicus
Pathway
vjp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NP165_05190 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vjp02000
]
NP165_05190 (msbA)
Enzymes [BR:
vjp01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NP165_05190 (msbA)
Transporters [BR:
vjp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NP165_05190 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
RsgA_GTPase
DEAD
APS_kinase
AAA_29
Zeta_toxin
AAA_24
nSTAND3
AAA_25
AAA_18
MMR_HSR1
SLFN-g3_helicase
TniB
G-alpha
AAA_15
DUF87
Motif
Other DBs
NCBI-ProteinID:
UUM31528
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All DBs
Position
1:1071587..1073335
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AA seq
582 aa
AA seq
DB search
MSLNKDETTWQTFKRLWVYIRLYKAGLAVAIVALIINAAADTYMVSLLKPLLDEGFGNAE
SEFFRILPLIILGMMIVRGLSSFVSSYCLSWVSGNVVMLMRRGIFKQFMHMPVSFFDKES
TGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVIAPIVAW
AIGFVSKRFRKISRNMQDAMGRVTSSAEQMLKGHKVVLSYGGQDLESQRFDAVSNQMRQQ
SMKLVAAKSIANPVIQVIASLALVVVLFLASVEEIRSQLTPGTFTVVFSAMFGLMRPLKA
LTNVTSDFQRGMAASQTLFALMDLETEKDKGTYETDRVRGDVEVKDVTFTYQGKEKPALR
DVSFKIPQGKSVALVGRSGSGKSTIANLFTRFYDVDSGSIMLDGHDVRDFKLKNLRSHFA
LVSQNVHLFNDTIANNIAYAAEEEYSREQIEEAARLAYAMDFIEPMENGLDTVIGENGAS
LSGGQRQRIAIARALLRDAPVLILDEATSALDTESEKAIQSALDELQKDKTVLVIAHRLS
TIENADEILVIDEGEVVERGDHQTLIAKDGAYAQLHRIQFGG
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcaataaagacgaaaccacttggcaaacctttaaacgcttgtgggtatatatt
cgcttgtataaagcgggtttggcggttgccatagtggcactgattatcaatgccgctgct
gacacttacatggtgtccttactaaagccgttgctggatgaaggcttcggtaacgcagaa
tctgaatttttccgtatattgccgcttatcattttaggaatgatgattgtacgtggactg
agtagttttgtttcctcctactgcttgagttgggtttccggcaatgtcgttatgttgatg
cgaagaggcatcttcaaacaatttatgcatatgcctgtctctttctttgataaagagtcc
actggcggtttactttcacgtatcacttacgattcggaacaagttgcaggggcgacaagc
cgagcgctcgtcagtattgtacgcgaaggggcgagcattattggcttgttgacgctaatg
ttttggaatagttggcaattgtcactggttcttatcgttatcgcgccaattgtggcatgg
gctatcggatttgtttctaaacgcttccgtaagatttctagaaacatgcaagacgcaatg
gggcgtgtgacgtcttctgctgagcaaatgcttaaagggcacaaagttgttttaagttat
ggtggtcaagatctcgaaagccaacgctttgacgctgtgagtaaccaaatgcgccagcag
tccatgaagttggtcgctgcaaagtcgattgccaaccctgttattcaggtgatcgcgtct
ttggctttggttgttgtccttttcctagcgagtgttgaagaaattcgtagtcagctaact
ccaggtacatttaccgttgtattctcggcaatgtttggtcttatgcgaccacttaaagcg
ctgacaaacgtaacatcggattttcaacgtggtatggcagcgagccagaccttgtttgcg
ttgatggaccttgaaacggaaaaagacaagggcacttacgaaacagatcgtgttcgtggg
gacgtggaagttaaagatgtgacattcacttatcaaggcaaagaaaaaccagcactacgc
gatgttagctttaaaattcctcaaggaaagagtgttgcgctggtaggtcgctctggctct
ggtaagagtaccatcgcgaatctgtttacccgtttttatgatgtggactcgggcagcatt
atgcttgatgggcatgatgttcgtgatttcaagttgaagaatttgcgctctcacttcgca
ttagtctctcagaacgtgcatttgtttaacgacaccatcgccaataacatcgcttatgct
gctgaagaagagtacagccgtgaacagatagaagaggcggcacgtttagcctatgcgatg
gactttattgagcctatggaaaatgggctcgatacggtgattggtgaaaacggcgcgagt
ctctctggtgggcaaagacaacgtatcgctattgctcgtgcattgctaagagatgcgcca
gttttgatcttggatgaagcgacgtctgcgttagatacagaatcagaaaaagctatccag
tcggcgctcgatgaattgcagaaagataagacggttcttgtgattgctcaccgcctatcc
accattgaaaacgcagatgaaattcttgttattgatgaaggtgaggttgtggagcgtggt
gatcaccaaacgcttatcgcgaaagatggtgcgtacgcgcaactacaccgtattcagttt
ggtggataa
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