Vibrio japonicus: NP165_05570
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Entry
NP165_05570 CDS
T08510
Symbol
rluB
Name
(GenBank) 23S rRNA pseudouridine(2605) synthase RluB
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
vjp
Vibrio japonicus
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vjp03009
]
NP165_05570 (rluB)
Enzymes [BR:
vjp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
NP165_05570 (rluB)
Ribosome biogenesis [BR:
vjp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NP165_05570 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UUM31602
LinkDB
All DBs
Position
1:1163769..1164707
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AA seq
312 aa
AA seq
DB search
MNEKLQKVLARAGHGSRRELEALIKAGRVSVNGVVAKLGERLEDENAIVRIDGHTVSAKA
PEEVICRVLAYYKPEGELCTRHDPEGRRTVFDRLPKIRGSRWISVGRLDANTSGLLLFTT
DGELANRLMHPSRQVEREYLVRVFGEVNEQKVKNLVRGVELEDGMARFEDVVYAGGDGMN
HTFYVAINEGRNREVRRLWESQDTTVSRLKRVRYGDIYLDKKLPRGGWMELDLKQVNYLR
ELVELRPERETLLDENKANTSRKRERSRSQKIRRAVKRHEERMNNGGGRSNNPARRKPKK
SAGEQGARNKQR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaagttacagaaagtattagcacgagcaggtcacggatcacgtcgcgagcta
gaagctttgattaaagctggccgcgtgagtgtgaacggggttgtcgctaagcttggtgag
cgattagaagatgagaacgcgatagttcgtatcgatggtcacactgtttctgctaaagcg
ccggaagaagtgatttgtcgtgttcttgcgtactataagccggaaggcgaactgtgtact
cgtcatgaccctgaaggtcgccgcactgtatttgaccgtctgccaaaaatccgtggttct
cgctggatttcagttggtcgtcttgatgcgaacacatctggtttacttcttttcacgact
gatggtgaactggcaaatcgcttgatgcacccaagccgtcaggtagagcgtgaatatcta
gtgcgtgtatttggtgaagtcaacgaacagaaagtcaaaaacttagttcgtggtgttgag
cttgaagatgggatggcgcgtttcgaagacgttgtatacgcaggtggtgatggtatgaac
cacactttctacgttgcaattaacgaaggtcgtaaccgagaagttcgtcgtctatgggaa
tctcaagacacgacagttagccgtctgaagcgtgttcgttacggtgatatctatctagat
aagaaattgccacgaggcggttggatggagcttgaccttaaacaggttaactacttgcgt
gagctggtagaacttcgtccagaaagagaaacactactagacgaaaacaaagcgaacaca
tcacgtaagcgtgagcgttctcgcagccaaaagattcgccgtgcagtgaaacgccacgaa
gagcgcatgaacaatggcggtggtcgtagcaacaatccagcacgccgaaagccaaagaaa
agtgcaggtgagcaaggcgctcgcaacaagcagcgctag
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