Vibrio japonicus: NP165_05775
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Entry
NP165_05775 CDS
T08510
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
vjp
Vibrio japonicus
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vjp01002
]
NP165_05775
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vjp01011
]
NP165_05775
Peptidases and inhibitors [BR:
vjp01002
]
Cysteine peptidases
Family C82
NP165_05775
Peptidoglycan biosynthesis and degradation proteins [BR:
vjp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NP165_05775
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Arch_fla_DE
Motif
Other DBs
NCBI-ProteinID:
UUM31642
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Position
1:1209328..1210881
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AA seq
517 aa
AA seq
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MLKWRTWLLTVVLLPLSVSASDYFEQLGWVKEQSELTNLIHYQDELEQVYQKNGNQLIWF
DLHQGSSLEFRLEVIQRAGFSPLFERQLSYLQYFRKSNRWHEYDLLATDTLLLYLNYAEK
AKSEGKDWFFGTQLDKPIRPILESSLMTLERAIENQQLAEVIDAYTPDSPDYKQLIESYL
ALINFQKVDLPFYQQTGLKREGDLLEDRDTLLARLELVDVDLSDVPRDLMEYDAALESAV
KRFQRLHGLKPDGVIGPKTIKWINMSIDSRLSQLALNAERTRYWPKARDTIIVVNVPSYD
MKYWSNGEQVFESKVVVGKKARPTPVMVTNLNALILNPTWNVPWKIMVEDIIPKVKRDPM
YLYRQNIEILPKWGSSERIDPTEINWASVNPKAFPYRMTQRSGYHNALGLYKFNTPNSRA
IYLHDTPSKGLFQSDQRAFSSGCIRVEHADVFADRLLKSQGISQTKVAEFNQQSNKAIPL
RKGIPVHIIYQTAWYEEGKTHYREDIYHLDSFSASKG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatggagaacgtggttactaacagttgtcttgctgccattatcagtgtcggcc
tcagattactttgagcaactcggttgggtaaaggaacaaagtgagttgaccaatctcatt
cattaccaagatgagttggaacaggtgtatcagaaaaatggcaaccaacttatctggttt
gatttacatcagggcagtagcctagagtttcggctggaagtgattcagcgtgcagggttt
agcccgctgtttgagcgccagctgagctatttacagtacttcagaaagagcaatcgttgg
catgaatacgatctgctcgcaacagacacactgttgctctacttaaactatgccgaaaaa
gcgaagtcagaaggcaaagattggttttttggcacgcagttggacaagccgattcgacct
atcttagaaagctcattaatgacactggaacgtgcgatagaaaaccagcagctagcagaa
gtcattgatgcctacacgccggattcaccagattataaacagttgatcgagagctatctg
gcactgattaatttccaaaaggttgatttacctttttaccaacagaccgggttaaagaga
gagggtgatcttctcgaagacagagacacactactggcgagattggagttagttgacgta
gacctgagtgatgtaccacgcgatcttatggagtatgacgcagcgcttgagtctgcggta
aaacgttttcagcgtttacatggcctaaaacccgatggcgtaattgggcctaagacgatc
aagtggatcaatatgtcgattgattctcgattgagtcaacttgctctcaatgcagaacgc
acgcgctattggcctaaagccagagacaccattattgtggtcaatgttccaagctacgat
atgaagtattggtctaatggggagcaagtgtttgaatctaaagttgtggtaggtaaaaag
gcacggccaacacctgtcatggtgaccaacttaaatgcgttgattctgaacccaacttgg
aatgtaccatggaaaatcatggtggaagatatcatccctaaagtgaaacgtgatcccatg
tacttgtacagacaaaatatagagattttgccaaagtggggttcttcggaaaggattgat
ccaacagaaatcaattgggcgagcgttaatcccaaagcctttccttatcgtatgacgcag
cgctcgggttatcacaacgctttaggtttgtataagtttaatacccctaatagtcgggcc
atctatctgcatgatacgccaagcaaaggtttgttccaaagcgatcaacgtgcctttagt
tctggctgtatccgtgtggaacatgctgacgtgtttgcggatcgactacttaaatcacaa
ggtatatcccaaactaaagtggctgagtttaatcaacaatcgaacaaagccattccgtta
cgtaaaggcattcctgttcatatcatctaccaaactgcgtggtatgaagaaggcaaaacc
cattaccgagaagatatttatcatctcgattcattcagtgcatctaaaggataa
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