Vibrio japonicus: NP165_06010
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Entry
NP165_06010 CDS
T08510
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vjp
Vibrio japonicus
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vjp03032
]
NP165_06010 (gyrA)
03400 DNA repair and recombination proteins [BR:
vjp03400
]
NP165_06010 (gyrA)
Enzymes [BR:
vjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NP165_06010 (gyrA)
DNA replication proteins [BR:
vjp03032
]
Prokaryotic type
DNA Topoisomerases
NP165_06010 (gyrA)
DNA repair and recombination proteins [BR:
vjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NP165_06010 (gyrA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPD52
ApbA
DUF6674
Motif
Other DBs
NCBI-ProteinID:
UUM31687
LinkDB
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Position
1:1264614..1267253
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AA seq
879 aa
AA seq
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MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVIDGCLAYINNEAITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKAEIETEKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIYELRKARERAHILEGLALALANIDEIIDLIRKAPTPAEAKAGLVARGWDLGNVA
AMLERAGTDAARPEWLEPQYGIRDGQYFLTEQQAQAILDLRLHKLTGLEHEKILAEYKEL
LEEIAELMHILASTERLMEVIREELEMVRDAFGDVRRTEITAASHDIDMEELIAREDVVV
TLSHEGYVKYQILSDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEEGERITAILPVDEFSPEKFIFMATGDGTVKKTSLD
QFANVRSNGLIAVNLRDDDSLIGVDITNGDSDIMLFSKAGKVVRFSEDKVRAMGRTASGV
RGMKLADNDQVVSLIVPSNEGDILTVTQNGYGKRTELAEYPTKGRATQGVVSIKVSERNG
PVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAEDESVVGLQRIDE
VDEADLPEGEDAEATEAGAEQQVSEAPKADDSAAEDNDA
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagctaaagagatcacgcccgtaaacattgaagatgagcttagaggttca
tacctcgactacgcgatgtccgtaatcgttggtcgtgctcttccagatgtgcgtgatggc
ctaaagccagtacaccgccgcgtactattcgcgatgaatgtactgggcaatgactggaat
aaaccatacaaaaaatctgcccgtgttgttggcgacgtaatcggtaaatatcacccacac
ggtgatagcgctgtgtacgacactatcgtacgtatggctcagccgttctcactacgttac
atgctcgttgatgggcaaggtaacttcggctccattgatggtgactcagcagcagcaatg
cgttataccgaagttcgtatggcgaaaatcgcccacgagcttctagctgatctagacaaa
gaaactgtagattacgtacctaactacgatggtacagagcaaatcccagcagttcttccg
acaaaaattcctaacctattggtaaacggtgcatctggtatcgcagtaggtatggcaacc
aacatcccgccacataaccttggcgaagtgatcgatggctgtcttgcgtacatcaataat
gaagcaatcactattgatgaactaatggattacatccctggtccagatttcccaactgcg
gcgcttatcagcggtcgtaaaggcatcgtagacgcgtacaaaacaggtcgcggtaagatc
tacatgcgttcaaaagcggaaatcgaaacagagaagaacggtaaagaaacaatcatcgtt
accgaaattccttaccaggtgaacaaagctcgtttgatcgaaaagatcgcagagcttgta
aaagataagaaagtagaaggcatcagtgctctacgcgacgagtcagacaaagatggtatg
cgtattgttattgaatgtaagcgtgacgcagtaggcgaagtggttctaaacaacctttac
gctcaaactcagctacaaacgactttcggcatcaacatggtcgcgctgaacaacggtcag
ccacagctattcaacctgaaagatatgttgaagtgctttgtggatcaccgtcgtgaagtg
gtgactcgtcgtactatttacgaattgcgtaaagctcgtgaacgcgcgcacatccttgaa
ggtcttgcacttgcacttgctaacattgatgaaatcatcgatctaattcgtaaagcaccg
acaccagcagaagcgaaagcgggtcttgttgctcgtggttgggatctaggtaacgtagca
gcaatgctagaacgcgcaggtactgacgcagctcgccctgaatggctagagccgcaatac
ggcatccgcgatggtcagtacttcctgactgagcaacaagcgcaagcaattctagatcta
cgtctacacaaactgactggtctagaacacgagaagattcttgctgaatacaaagagctt
ctagaagaaatcgcagagctgatgcacattcttgcaagcacagaacgcttgatggaagtg
atccgcgaagagctagaaatggttcgcgatgcatttggtgatgttcgtcgtacggaaatc
acagcagctagccatgacatcgatatggaagagctgatcgctcgtgaagatgtagtggtt
acactttctcacgaaggctacgtgaagtaccaaatcctaagtgactacgaagctcagcgt
cgtggtggtaaaggtaagagtgcaactcgaatgaaggatgaagactacattgagcgtctt
ctagtggcgaatacccacgacaacattctttgtttctctactcgcggtaagacttaccgt
ctgaaagtttaccaattgccactagcgagccgtactgctcgtggtaaaccaatcgtgaat
attcttccactggaagaaggcgaacgtatcactgcaatcctaccagttgatgaattctct
ccagagaaattcattttcatggcaacaggtgatggtaccgttaagaagacatctcttgac
caattcgctaacgtacgttcaaacggtttaatcgcagttaacctacgtgatgacgactct
ctaattggtgttgatattactaacggtgacagcgacatcatgctgttctcgaaggcgggt
aaagttgttcgctttagcgaagacaaagtacgcgccatgggccgcacggcgtcaggtgtt
cgtggtatgaaactagcggataacgatcaggtggtatctctgatagttccttctaatgaa
ggagacatcctaacggtaacgcaaaatggttacggtaagcgtactgagctagcagaatac
ccaacgaaaggtcgtgcaactcagggcgttgtgtctatcaaggtttctgagcgtaatggt
ccagttgttggagcagtacaagttgaggaaggcgacgagatgatgatgatcaccgacgct
ggtactcttgtacgtacacgcgttgcagaagttagccaagtaggtcgaaatacccaaggt
gtgactcttatccgtacagcagaagatgagtcagtggttggactacagcgtattgacgaa
gttgacgaagcagatttaccagaaggtgaagacgcagaagcaacagaagcaggcgcagag
cagcaagtatctgaagcaccaaaagcggatgattccgcagcagaagacaacgacgcttaa
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