Vibrio japonicus: NP165_08255
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Entry
NP165_08255 CDS
T08510
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vjp
Vibrio japonicus
Pathway
vjp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NP165_08255 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vjp03400
]
NP165_08255 (ruvB)
Enzymes [BR:
vjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NP165_08255 (ruvB)
DNA repair and recombination proteins [BR:
vjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NP165_08255 (ruvB)
RecFOR pathway proteins
NP165_08255 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
Rad17
AAA_14
AAA_3
AAA_22
nSTAND3
NTPase_1
TIP49
AAA_18
RNA_helicase
AAA_17
Bac_DnaA
Sigma54_activ_2
DUF815
AAA_2
AAA_24
NB-ARC
AAA_28
ABC_tran
TniB
TsaE
bpMoxR
AAA_PrkA
NPHP3_N
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
UUM29707
LinkDB
All DBs
Position
1:complement(1741797..1742801)
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AA seq
334 aa
AA seq
DB search
MIEADRLIAPENPVYREEDVIDRAIRPKKLEDYKGQDHVRDQMEIFIKAAQLREEALDHL
LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL
SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLVGATTRAGSLTSPLRDRFGIT
QRLEYYNIPDLQNIVQRSADCLGLSMDAEGALEVARRARGTPRIANRLLRRVRDYAEVKG
NGHICAETADKALNMLDVDAQGFDYMDRKLLLAIMEKFGGGPVGLDNMAAAIGEEKDTIE
DVLEPYLIQQGYLQRTPRGRIATDRAYLHFGIEK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcggatcgccttatagcgccagaaaatcccgtttatcgcgaagaagatgtg
attgatcgcgccattcgacctaaaaagttagaagactataaaggccaagatcatgtgcgt
gatcaaatggaaatattcattaaggccgcccagcttcgtgaagaagccttggatcatctt
ctaatctttggtcctcccggcttagggaaaacaacattagccaacatcgtcgcaaatgaa
atgggtgtcaatattcgcaccacatcaggccctgttttagaaaaggcgggtgacttggcc
gcgttgctgaccaaccttgaagaaaacgatgtgttgtttattgatgaaattcaccgccta
agtcctatggtcgaagaggtgctgtatccagcaatggaagattatcagctggacattatg
atcggtgaagggcctgcagcacgctcaatcaagattgacctgcctccatttactttggtt
ggtgcaacgactcgcgcgggttcgttaacgtcaccactgcgtgaccgattcggtattact
caaaggttggaatactacaatattccagacctccaaaacattgtacaacgcagcgcggac
tgcctcgggttatctatggatgcagaaggggcgttggaagtggcaagacgagcgcgaggg
acgccacgtattgcaaaccgactgctacgacgtgtacgagactatgcggaagttaaaggc
aacggccatatttgtgcagaaacggcagacaaagcactgaatatgctggatgtggatgcc
caaggctttgactatatggatagaaagttgctactcgcgattatggagaaattcggtggc
ggtccagttggtctggataacatggcagccgcgattggtgaagagaaagacaccatcgaa
gatgtactagaaccctatttgattcagcaaggctacctgcaaaggacaccaagaggtcgt
atagccacagacagagcctacctccatttcggaattgaaaaataa
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