Vibrio japonicus: NP165_08975
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Entry
NP165_08975 CDS
T08510
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vjp
Vibrio japonicus
Pathway
vjp02020
Two-component system
vjp02040
Flagellar assembly
vjp05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NP165_08975
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
NP165_08975
09142 Cell motility
02040 Flagellar assembly
NP165_08975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vjp02022
]
NP165_08975
02035 Bacterial motility proteins [BR:
vjp02035
]
NP165_08975
Two-component system [BR:
vjp02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
NP165_08975
Bacterial motility proteins [BR:
vjp02035
]
Flagellar system
Flagellar assembly proteins
Others
NP165_08975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
FleQ
AAA_16
HTH_20
Mg_chelatase
MerR
HTH_24
AAA_7
HTH_11
HTH_28
AAA_19
AAA_3
OKR_DC_1_N
DUF2089
AAA
MCM
HTH_Crp_2
HTH_5
MFD_D3
HTH_10
Sigma70_r4_2
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UUM29845
LinkDB
All DBs
Position
1:complement(1899975..1901381)
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AA seq
468 aa
AA seq
DB search
MTQSKVLIVEDDEGLREALVDTLALAGYEWLEADSAEDALIKLKTNSVDIVVSDVQMAGM
GGLALLRNIKQHWPNLPVLLMTAYANIEDAVSSMKDGAIDYMAKPFAPEVLLNMVSRYAP
VKSEDNGDAIVADEKSIKLLALADKVAKTDASVMVLGPSGSGKEVMSRYLHNASNRKNGP
FVAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQAK
LLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKSYVQEGNFREDLYYRLNVFPIAWPAL
CERKGDIAPLAQHLIERNAKKLGMPVLTLSESALQKLLAYHWPGNVRELDNVVQRALILG
ENGSIGAEHILLEGLDWQDACGLQQAVETGNVTAPTIKPVAQVEQAKSVTTSSGLGGELR
DQEFAIIMDTLTECHGRRKEMAEKLGISPRTLRYKLAKMRDAGIDIPN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaagcaaagtactgattgttgaagacgatgaaggtttgcgtgaagcactggtt
gatacgctggcattagccgggtatgaatggcttgaagctgacagcgcagaagatgccttg
attaagctaaaaacgaacagtgtggatattgtcgtctctgacgttcaaatggctggaatg
ggtggtcttgctctgctacggaatatcaaacagcattggccaaacttacctgtgctgtta
atgactgcatacgcgaatatcgaagatgccgtttcctcaatgaaagacggcgctatcgac
tatatggcgaaaccttttgcaccagaagtgcttttgaatatggtcagccgatacgccccc
gtcaaatccgaggataacggtgatgcaatcgtcgcggatgaaaaaagcatcaagctgttg
gcgttggcggataaagtggcgaaaactgacgcgagtgtgatggtattggggccaagtggt
tccggtaaagaggtgatgtctcgttacctacataacgcgtccaaccgaaaaaatggccca
ttcgtcgcgatcaactgcgcagctattcccgacaacatgcttgaagctacgctgtttggc
tacgaaaaaggcgcgtttactggcgccgtgcaagcatgcccaggaaagtttgagcaagca
caaggtggcaccatcttgctagacgaaatcagcgaaatggatctaaatctgcaagctaag
ttacttcgcgttcttcaagagcgagaagtcgagcgacttggtagccgcaagagcatcaag
ttggatgttcgtgttttagcaaccagtaaccgagatttgaagtcgtacgtacaagaaggt
aatttccgagaagacttgtactaccgcttgaacgtatttccaattgcatggccagcgctg
tgtgaacgcaaaggtgatattgctcctcttgctcagcatttaattgagcgtaatgccaaa
aaactggggatgccagtgctgacgctttctgagagtgcattacaaaaactcctcgcttat
cactggccaggcaatgttcgagagcttgataacgtggttcagcgagcattgattcttgga
gaaaacggcagtatcggcgcagagcacatcttgcttgaaggtttggattggcaagacgct
tgtggacttcagcaagcggttgaaacgggtaatgtcactgcacctaccattaagcctgta
gcgcaagtagagcaagccaaaagcgttactacgagttcaggtctgggcggcgaattaaga
gatcaagagtttgccattattatggatactttgactgagtgtcacggacgtagaaaagag
atggccgagaagctaggtattagcccgcgcaccttgcgctacaagttagcaaaaatgcga
gatgctgggattgatattccaaactaa
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