Vibrio japonicus: NP165_09545
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Entry
NP165_09545 CDS
T08510
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
vjp
Vibrio japonicus
Brite
KEGG Orthology (KO) [BR:
vjp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vjp01011
]
NP165_09545
Enzymes [BR:
vjp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NP165_09545
Peptidoglycan biosynthesis and degradation proteins [BR:
vjp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NP165_09545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM3_NFP
Motif
Other DBs
NCBI-ProteinID:
UUM29953
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All DBs
Position
1:2016638..2018191
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AA seq
517 aa
AA seq
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MRVTYSWVLALLLAGCQLTQPTDSGENASSATNNTPAVDQTESSQHNANPQPVETPQSQE
DVWQRIAMQLEMPIPDHKAVNYYRSWYLKHPNHLKTVSKRAEPFLYLITEEIEERGLPLE
LALLPVVESSFDAFAYSHGSAAGLWQFIPSTGKMFGLEQNFWYDGRRDVSKSTDAALTYL
TNLNKRFDGEWTHAIAAYNSGGGRVSRAIRKNNGLGKPIDFFSLDLPKETSGYVPKLLAL
ADVIANQEKYGIKIPPIANKPVVTLVDPKEQLDLAIAAQYAGISVKQLQSLNPAYNQWST
APSGPHQLLIPNHSVDKFKVEVEKNRGKGLKLVRYKVKSGDSLSVLAKRNNTTTKVIQKA
NGLNGHNIRAGQYLLIPVSAKEEQTYELSATNRLAKTQSKSRGKYKLTHTVSSGESLWSI
AKANKVSHQSLAKWNGMGPRDTLRQGQKLVIWKDNTDGGIIRTVFYKVRSGDTISGIANK
FKVKSQDIVKWNGLSKATFIKPGQQLKLYVDVTKVSV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtaacgtacagctgggtattagcacttttattagccggatgtcagctaacccag
ccaactgattctggagagaatgcctcttcagccaccaacaatacccctgcggtcgatcag
actgaatcttctcaacataacgcgaatccgcaacctgttgagaccccccaatctcaagaa
gacgtatggcaacgtatcgctatgcagctagagatgcctatcccagatcataaagcggtc
aactactatcgatcgtggtatctaaagcacccaaatcatttaaaaacggtttctaagcgt
gctgaacccttcctctatctcattacagaagagatagaagagcgtggcctaccactggaa
ttggcgttgcttcccgtcgtagagagttcgtttgatgcgtttgcctactctcacggaagt
gctgcgggtttatggcagtttatcccttcaactggcaaaatgtttggccttgaacaaaac
ttttggtacgacggtcgtcgtgatgtatccaaatctaccgatgcagcacttacctacctc
accaacctcaataaacgattcgacggcgaatggacgcatgcaattgccgcttacaacagt
ggcggtggtcgtgtatctcgggcaatacgaaagaataacggactagggaaacctatcgac
ttcttctctcttgatctgcctaaagagacaagtggttacgtaccaaaacttctggcgctc
gcagatgttattgcgaatcaggagaaatatggcatcaaaataccgccaattgcgaacaag
ccagttgtgactttggtcgacccgaaagaacagttggatctcgctatcgcagcgcaatac
gcaggtatttctgttaaacaacttcaaagtttaaaccctgcttataaccaatggtcaacc
gcgccaagcggaccacatcaactacttattcctaaccactccgttgataaattcaaagtc
gaagtagagaaaaatcgcggtaaagggttaaagctagtgcggtacaaagtgaagtctggc
gactctctgagtgtcttggctaagcgcaataacacgaccacgaaagtgattcagaaagcc
aacggtctgaatggacacaatatccgcgcgggtcaatacttattgatacctgtctctgcg
aaagaagaacagacctacgaactgtcagcgacaaatcgtcttgcgaaaacgcaatcaaag
agtcgtggtaagtacaagctaacacacacagtctcttcaggtgaaagtctttggagtatc
gctaaagccaataaggtgtctcatcaatccctagcgaaatggaatggcatggggccacgc
gatacgctgcgtcaaggccaaaaactggttatttggaaagacaatactgatggcggaatt
atccgaaccgttttctataaagtacgttcaggtgacaccatcagtggcatagcgaacaag
ttcaaagtgaaatcacaagatattgtcaaatggaatggtttgagcaaagccacattcatt
aagcccgggcaacaactcaaactctatgtggatgtgactaaggtaagcgtatga
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